Cytometry8
Cytometry8 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
50,000 × 11
Missing
0
Format
rda · bzip2
version 3 · 726 KB
File
data/Cytometry8.RData
Fingerprint
077efb5a
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger4,5360-2823 – 9940mean 2633
Min.
-2823
1st Qu.
2103
Median
2423
Mean
2632.93
3rd Qu.
2755
Max.
9940
Std. dev
1095.28
Skewness
2.318
Kurtosis
5.768
Zeros
1
Outliers
4,581723 low · 3858 high
CD38:APC H7-A LOGICALinteger5,3880-2318 – 9509mean 3280
Min.
-2318
1st Qu.
2736
Median
3239
Mean
3279.96
3rd Qu.
3740
Max.
9509
Std. dev
944.107
Skewness
0.2294
Kurtosis
1.624
Outliers
2,167842 low · 1325 high
CD3:APC-A LOGICALinteger5,4530-2103 – 8332mean 3482
Min.
-2103
1st Qu.
2263
Median
2862
Mean
3482.17
3rd Qu.
3635
Max.
8332
Std. dev
1939.93
Skewness
1.021
Kurtosis
-0.2837
Outliers
10,40385 low · 10318 high
CD4+CD20:PB-A LOGICALinteger6,3220-1691 – 8873mean 3569
Min.
-1691
1st Qu.
2888
Median
3359
Mean
3568.59
3rd Qu.
4033
Max.
8873
Std. dev
1413.56
Skewness
0.4099
Kurtosis
0.041
Outliers
7,8291857 low · 5972 high
CD45:PO-A LOGICALinteger5,1270-562 – 9031mean 4422
Min.
-562
1st Qu.
4124
Median
4485
Mean
4422.44
3rd Qu.
5289
Max.
9031
Std. dev
1092.09
Skewness
-1.36
Kurtosis
1.852
Outliers
4,2074199 low · 8 high
CD56+IgK:PE-A LOGICALinteger6,2190-1693 – 11463mean 2789
Min.
-1693
1st Qu.
2101
Median
2719
Mean
2789.15
3rd Qu.
3284
Max.
11463
Std. dev
1152.31
Skewness
0.7325
Kurtosis
1.623
Outliers
2,738377 low · 2361 high
CD5:PerCP Cy5-5-A LOGICALinteger5,6150-1028 – 12268mean 3089
Min.
-1028
1st Qu.
2193
Median
2488
Mean
3088.59
3rd Qu.
3149.25
Max.
12268
Std. dev
1475.58
Skewness
1.274
Kurtosis
0.3147
Outliers
10,099168 low · 9931 high
CD8+IgL:FITC-A LOGICALinteger6,2270-844 – 9868mean 3611
Min.
-844
1st Qu.
3008
Median
3502
Mean
3611.31
3rd Qu.
3969
Max.
9868
Std. dev
1252.04
Skewness
0.5171
Kurtosis
0.4801
Zeros
1
Outliers
7,4842082 low · 5402 high
FSC-A LINEARinteger5,5660-3324 – 12246mean 2800
Min.
-3324
1st Qu.
1818
Median
3220
Mean
2800.46
3rd Qu.
3874
Max.
12246
Std. dev
1297.4
Skewness
-0.4104
Kurtosis
-0.485
Zeros
4
Outliers
9248 low · 44 high
SSC-A Exp-SSC Lowinteger7,0060-3220 – 11791mean 3457
Min.
-3220
1st Qu.
1120
Median
4006.5
Mean
3456.69
3rd Qu.
5548
Max.
11791
Std. dev
2228.18
Skewness
-0.1038
Kurtosis
-1.691
Zeros
1
Population ID (name)factor300Neutrophils22,934other type of Debris6,029CD4+CD8-5,966Monocytes3,380CD8+CD4-3,311Mature SIg Kappa1,589+24 more
Neutrophils22,934other type of Debris6,029CD4+CD8-5,966Monocytes3,380CD8+CD4-3,311Mature SIg Kappa1,589+24 more
Levels
30
Used
30
Rows per level
Neutrophils22,934other type of Debris6,029CD4+CD8-5,966Monocytes3,380CD8+CD4-3,311Mature SIg Kappa1,589Mature SIg Lambda1,279CD56dim1,081debris neutrophils963Eosinophils796TCRgd+672doublets neutrophils438Basophils389debris T cells224Monocytoid DC224CD56bright107doublets T cells102Plasmocytoid DC99debris axis77TCRgd-77doublets eosinophils56CD4+CD8dim51Myeloid DC44doublets B cells29doublets monocytes26other type of Doublets19doublets axis17doublets NK cells9debris B cells7PLASMA CELLS5
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.22 | 2025-10-29 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.21 | 2025-04-15 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.20 | 2024-10-29 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.19 | 2024-04-30 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.18 | 2023-10-24 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.17 | 2023-04-25 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.16 | 2022-11-01 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.15 | 2022-04-26 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.14 | 2021-10-26 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.13 | 2021-05-19 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.12 | 2020-10-27 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 726 KB | exact |
| 3.11 | 2020-04-27 | 50,000 × 11 | – | rda · bzip2 version 3 · 726 KB | exact |