Cytometry10
Cytometry10 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
100,000 × 11
Missing
0
Format
rda · xz
version 3 · 1.4 MB
File
data/Cytometry10.RData
Fingerprint
2befc979
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger4,7070-1397 – 9406mean 2331
Min.
-1397
1st Qu.
2054
Median
2240
Mean
2330.87
3rd Qu.
2438
Max.
9406
Std. dev
673.234
Skewness
3.554
Kurtosis
17.97
Outliers
8,2682427 low · 5841 high
CD38:APC H7-A LOGICALinteger4,9350-952 – 10768mean 2843
Min.
-952
1st Qu.
2443
Median
2704
Mean
2842.67
3rd Qu.
3035
Max.
10768
Std. dev
700.118
Skewness
1.562
Kurtosis
4.71
Outliers
9,5421023 low · 8519 high
CD3:APC-A LOGICALinteger6,3020-1764 – 10738mean 3654
Min.
-1764
1st Qu.
2742
Median
3138
Mean
3653.94
3rd Qu.
3679
Max.
10738
Std. dev
1585.32
Skewness
1.273
Kurtosis
0.4633
Outliers
18,7051170 low · 17535 high
CD4+CD20:PB-A LOGICALinteger6,6990-2327 – 11896mean 3512
Min.
-2327
1st Qu.
3028
Median
3322
Mean
3512.02
3rd Qu.
3680
Max.
11896
Std. dev
1116.5
Skewness
0.6644
Kurtosis
1.643
Outliers
19,9956101 low · 13894 high
CD45:PO-A LOGICALinteger4,3130-68 – 9350mean 4402
Min.
-68
1st Qu.
4044
Median
4257
Mean
4401.53
3rd Qu.
4733
Max.
9350
Std. dev
657.493
Skewness
-0.2648
Kurtosis
2.431
Zeros
1
Outliers
2,9312356 low · 575 high
CD56+IgK:PE-A LOGICALinteger6,6220-2332 – 10020mean 2551
Min.
-2332
1st Qu.
2017
Median
2395
Mean
2550.67
3rd Qu.
2798
Max.
10020
Std. dev
1019.09
Skewness
1.525
Kurtosis
3.926
Outliers
10,9271840 low · 9087 high
CD5:PerCP Cy5-5-A LOGICALinteger5,8200-1202 – 9784mean 2865
Min.
-1202
1st Qu.
2148
Median
2364
Mean
2864.7
3rd Qu.
2695
Max.
9784
Std. dev
1300.38
Skewness
1.555
Kurtosis
1.073
Outliers
19,5661058 low · 18508 high
CD8+IgL:FITC-A LOGICALinteger6,1610-1978 – 10802mean 3705
Min.
-1978
1st Qu.
3358
Median
3615
Mean
3704.74
3rd Qu.
3888
Max.
10802
Std. dev
966.738
Skewness
0.9035
Kurtosis
2.791
Outliers
20,7899171 low · 11618 high
FSC-A LINEARinteger6,4280-3444 – 13605mean 3903
Min.
-3444
1st Qu.
2865
Median
4368
Mean
3902.82
3rd Qu.
4704
Max.
13605
Std. dev
1218.4
Skewness
-0.8566
Kurtosis
0.6384
Outliers
640404 low · 236 high
SSC-A Exp-SSC Lowinteger6,8120-2157 – 11347mean 4017
Min.
-2157
1st Qu.
2868.75
Median
4705
Mean
4017.28
3rd Qu.
5150
Max.
11347
Std. dev
1660.63
Skewness
-0.848
Kurtosis
-0.6504
Outliers
4021 low · 19 high
Population ID (name)factor290Neutrophils68,381CD4+CD8-9,659CD8+CD4-4,506debris RBC3,058Monocytes2,463doublets neutrophils1,572+23 more
Neutrophils68,381CD4+CD8-9,659CD8+CD4-4,506debris RBC3,058Monocytes2,463doublets neutrophils1,572+23 more
Levels
29
Used
29
Rows per level
Neutrophils68,381CD4+CD8-9,659CD8+CD4-4,506debris RBC3,058Monocytes2,463doublets neutrophils1,572other type of Debris1,555CD56dim1,511TCRgd-1,001Mature SIg Kappa957debris neutrophils851debris T cells750Mature SIg Lambda646Eosinophils614doublets T cells587debris monocytes473debris B cells362doublets monocytes334CD4+CD8dim234other type of Doublets117doublets eosinophils88debris axis82CD56bright67CD4+CD8+40debris NK cells29PLASMA CELLS29Other nucleated cells23debris eosinophils9doublets B cells2
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.22 | 2025-10-29 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.21 | 2025-04-15 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.20 | 2024-10-29 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.19 | 2024-04-30 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.18 | 2023-10-24 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.17 | 2023-04-25 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.16 | 2022-11-01 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.15 | 2022-04-26 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.14 | 2021-10-26 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.13 | 2021-05-19 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.12 | 2020-10-27 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.11 | 2020-04-27 | 100,000 × 11 | – | rda · xz version 3 · 1.4 MB | exact |