Cytometry7
Cytometry7 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
50,000 × 11
Missing
0
Format
rda · bzip2
version 3 · 724 KB
File
data/Cytometry7.RData
Fingerprint
b30b0553
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger4,1560-729 – 8836mean 2523
Min.
-729
1st Qu.
2133
Median
2480
Mean
2522.66
3rd Qu.
2824
Max.
8836
Std. dev
739.153
Skewness
2.063
Kurtosis
9.991
Outliers
2,061718 low · 1343 high
CD38:APC H7-A LOGICALinteger5,6060-2007 – 10094mean 3404
Min.
-2007
1st Qu.
2829
Median
3254.5
Mean
3404.43
3rd Qu.
3811
Max.
10094
Std. dev
996.257
Skewness
0.6613
Kurtosis
1.617
Outliers
3,271710 low · 2561 high
CD3:APC-A LOGICALinteger5,7750-2282 – 9825mean 3530
Min.
-2282
1st Qu.
2494
Median
3093
Mean
3529.8
3rd Qu.
3681
Max.
9825
Std. dev
1817.93
Skewness
1.007
Kurtosis
0.0743
Zeros
2
Outliers
9,759704 low · 9055 high
CD4+CD20:PB-A LOGICALinteger6,0310-1710 – 8177mean 3680
Min.
-1710
1st Qu.
3198
Median
3604
Mean
3680.29
3rd Qu.
4072
Max.
8177
Std. dev
1223.44
Skewness
0.1149
Kurtosis
0.6622
Outliers
11,1144023 low · 7091 high
CD45:PO-A LOGICALinteger4,4820-963 – 8381mean 4687
Min.
-963
1st Qu.
4500
Median
4729
Mean
4687.22
3rd Qu.
5270
Max.
8381
Std. dev
890.838
Skewness
-2.101
Kurtosis
5.949
Outliers
3,9243747 low · 177 high
CD56+IgK:PE-A LOGICALinteger6,0180-1404 – 10876mean 2860
Min.
-1404
1st Qu.
2243
Median
2770
Mean
2860.23
3rd Qu.
3320
Max.
10876
Std. dev
1108.33
Skewness
0.7287
Kurtosis
1.885
Outliers
3,112645 low · 2467 high
CD5:PerCP Cy5-5-A LOGICALinteger5,7170-1785 – 9803mean 3035
Min.
-1785
1st Qu.
2190
Median
2478
Mean
3035.19
3rd Qu.
2963
Max.
9803
Std. dev
1458.83
Skewness
1.401
Kurtosis
0.6727
Outliers
9,658281 low · 9377 high
CD8+IgL:FITC-A LOGICALinteger5,8880-1417 – 10410mean 3514
Min.
-1417
1st Qu.
3014
Median
3394
Mean
3514.36
3rd Qu.
3886
Max.
10410
Std. dev
1101.92
Skewness
0.6157
Kurtosis
1.254
Outliers
6,3092334 low · 3975 high
FSC-A LINEARinteger5,4340-4258 – 12301mean 2747
Min.
-4258
1st Qu.
1761
Median
3039
Mean
2747.42
3rd Qu.
3570
Max.
12301
Std. dev
1172.09
Skewness
0.0222
Kurtosis
2.073
Zeros
1
Outliers
34936 low · 313 high
SSC-A Exp-SSC Lowinteger7,1100-3312 – 13474mean 3810
Min.
-3312
1st Qu.
1222
Median
5020
Mean
3810.28
3rd Qu.
5674
Max.
13474
Std. dev
2225.99
Skewness
-0.3198
Kurtosis
-1.465
Outliers
20 low · 2 high
Population ID (name)factor310Neutrophils25,956CD4+CD8-5,876Monocytes4,361other type of Debris4,052CD8+CD4-2,467CD56dim2,225+25 more
Neutrophils25,956CD4+CD8-5,876Monocytes4,361other type of Debris4,052CD8+CD4-2,467CD56dim2,225+25 more
Levels
31
Used
31
Rows per level
Neutrophils25,956CD4+CD8-5,876Monocytes4,361other type of Debris4,052CD8+CD4-2,467CD56dim2,225Eosinophils1,505Monocytoid DC565Basophils388Mature SIg Kappa346Mature SIg Lambda343doublets T cells301doublets neutrophils285debris neutrophils261doublets eosinophils175CD56bright162TCRgd+157Plasmocytoid DC130debris T cells107TCRgd-77PLASMA CELLS40debris axis39CD4+CD8dim32Myeloid DC28doublets B cells26other type of Doublets26doublets monocytes19doublets axis16doublets NK cells14Neutrophils (U.S.)12debris B cells9
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.22 | 2025-10-29 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.21 | 2025-04-15 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.20 | 2024-10-29 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.19 | 2024-04-30 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.18 | 2023-10-24 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.17 | 2023-04-25 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.16 | 2022-11-01 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.15 | 2022-04-26 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.14 | 2021-10-26 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.13 | 2021-05-19 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.12 | 2020-10-27 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 724 KB | exact |
| 3.11 | 2020-04-27 | 50,000 × 11 | – | rda · bzip2 version 3 · 724 KB | exact |