Cytometry25
Cytometry25
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
100,000 × 11
Missing
0
Format
rda · bzip2
version 3 · 1.4 MB
File
data/Cytometry25.RData
Fingerprint
37b7abbb
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger4,7710-524 – 7942mean 3134
Min.
-524
1st Qu.
2569
Median
2751
Mean
3134.26
3rd Qu.
3698
Max.
7942
Std. dev
891.658
Skewness
1.059
Kurtosis
0.2283
Outliers
1,28652 low · 1234 high
CD38:APC H7-A LOGICALinteger3,8370200 – 7135mean 3303
Min.
200
1st Qu.
2980
Median
3211
Mean
3302.51
3rd Qu.
3576
Max.
7135
Std. dev
557.022
Skewness
0.5607
Kurtosis
1.265
Outliers
4,8061281 low · 3525 high
CD3:APC-A LOGICALinteger6,1460-1744 – 8675mean 2949
Min.
-1744
1st Qu.
2181
Median
2658
Mean
2949.37
3rd Qu.
3176
Max.
8675
Std. dev
1370.22
Skewness
1.723
Kurtosis
2.779
Outliers
10,313670 low · 9643 high
CD4+CD20:PB-A LOGICALinteger6,1090-149 – 8463mean 4150
Min.
-149
1st Qu.
3104
Median
3660.5
Mean
4150.05
3rd Qu.
5683
Max.
8463
Std. dev
1412.54
Skewness
0.3566
Kurtosis
-1.097
CD45:PO-A LOGICALinteger4,1710171 – 7484mean 4057
Min.
171
1st Qu.
3818
Median
4172
Mean
4057.3
3rd Qu.
4466
Max.
7484
Std. dev
661.614
Skewness
-1.004
Kurtosis
1.493
Outliers
7,5217143 low · 378 high
CD56+IgK:PE-A LOGICALinteger6,1910-1355 – 7846mean 3239
Min.
-1355
1st Qu.
2496
Median
3335
Mean
3238.74
3rd Qu.
4020
Max.
7846
Std. dev
1105.37
Skewness
-0.2337
Kurtosis
-0.1251
Zeros
2
Outliers
480332 low · 148 high
CD5:PerCP Cy5-5-A LOGICALinteger5,5950-583 – 8194mean 3157
Min.
-583
1st Qu.
2541
Median
2854
Mean
3157.48
3rd Qu.
3511
Max.
8194
Std. dev
977.671
Skewness
1.463
Kurtosis
2.067
Outliers
7,821106 low · 7715 high
CD8+IgL:FITC-A LOGICALinteger5,7050-725 – 7854mean 2760
Min.
-725
1st Qu.
2119.75
Median
2655
Mean
2760.47
3rd Qu.
3183
Max.
7854
Std. dev
956.363
Skewness
1.234
Kurtosis
2.454
Outliers
5,506235 low · 5271 high
FSC-A LINEARinteger6,1310-5346 – 11101mean 2056
Min.
-5346
1st Qu.
1446
Median
1916
Mean
2055.53
3rd Qu.
2742
Max.
11101
Std. dev
983.817
Skewness
0.5103
Kurtosis
2.915
Zeros
9
Outliers
1,568577 low · 991 high
SSC-A Exp-SSC Lowinteger7,9220-2834 – 10634mean 2775
Min.
-2834
1st Qu.
1061
Median
2430.5
Mean
2775.34
3rd Qu.
4508
Max.
10634
Std. dev
1838.21
Skewness
0.2316
Kurtosis
-1.245
Zeros
4
Outliers
110 low · 11 high
Population ID (name)factor170Neutrophils39,834Abnormal SIg Kappa24,819DEBRIS17,850CD8+CD4-4,414CD4+CD8-3,879DOUBLETS3,851+11 more
Neutrophils39,834Abnormal SIg Kappa24,819DEBRIS17,850CD8+CD4-4,414CD4+CD8-3,879DOUBLETS3,851+11 more
Levels
17
Used
17
Rows per level
Neutrophils39,834Abnormal SIg Kappa24,819DEBRIS17,850CD8+CD4-4,414CD4+CD8-3,879DOUBLETS3,851Monocytes1,319CD56dim962NUCLEATED CELLS915CD56bright595Mature B cells409NUCLEATED RED CELLS347Eosinophils263CD4+CD8dim192TCRgd-174TCRgd+94T CELLS83
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.22 | 2025-10-29 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.21 | 2025-04-15 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.20 | 2024-10-29 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.19 | 2024-04-30 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.18 | 2023-10-24 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.17 | 2023-04-25 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.16 | 2022-11-01 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.15 | 2022-04-26 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.14 | 2021-10-26 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.13 | 2021-05-19 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.12 | 2020-10-27 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.11 | 2020-04-27 | 100,000 × 11 | – | rda · bzip2 version 3 · 1.4 MB | exact |