Cytometry22
Cytometry22
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
100,000 × 11
Missing
0
Format
rda · xz
version 3 · 1.4 MB
File
data/Cytometry22.RData
Fingerprint
d41b52f8
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger5,3880-718 – 8085mean 3174
Min.
-718
1st Qu.
2602
Median
2769
Mean
3174.17
3rd Qu.
3016
Max.
8085
Std. dev
1086.71
Skewness
1.67
Kurtosis
1.607
Outliers
19,2611427 low · 17834 high
CD38:APC H7-A LOGICALinteger4,0730-309 – 7728mean 3434
Min.
-309
1st Qu.
3058
Median
3237
Mean
3433.74
3rd Qu.
3729
Max.
7728
Std. dev
611.518
Skewness
1.156
Kurtosis
1.966
Outliers
4,344406 low · 3938 high
CD3:APC-A LOGICALinteger6,4460-1777 – 9534mean 3365
Min.
-1777
1st Qu.
2570
Median
2961
Mean
3364.51
3rd Qu.
3455
Max.
9534
Std. dev
1391.81
Skewness
1.559
Kurtosis
1.592
Outliers
14,480604 low · 13876 high
CD4+CD20:PB-A LOGICALinteger6,1440-700 – 9359mean 3941
Min.
-700
1st Qu.
2922
Median
3524
Mean
3940.55
3rd Qu.
4976
Max.
9359
Std. dev
1346.92
Skewness
0.6012
Kurtosis
-0.6346
Outliers
303 low · 27 high
CD45:PO-A LOGICALinteger4,0650797 – 8197mean 4310
Min.
797
1st Qu.
4040
Median
4310
Mean
4310.11
3rd Qu.
4611
Max.
8197
Std. dev
534.802
Skewness
-0.5029
Kurtosis
3.196
Outliers
4,3613070 low · 1291 high
CD56+IgK:PE-A LOGICALinteger5,5440-1466 – 8836mean 2552
Min.
-1466
1st Qu.
2135
Median
2497
Mean
2552.03
3rd Qu.
2852
Max.
8836
Std. dev
749.94
Skewness
1.383
Kurtosis
5.796
Outliers
5,6121235 low · 4377 high
CD5:PerCP Cy5-5-A LOGICALinteger5,5890-333 – 8957mean 3316
Min.
-333
1st Qu.
2560
Median
2794
Mean
3316.06
3rd Qu.
4059
Max.
8957
Std. dev
1157.75
Skewness
1.181
Kurtosis
0.2348
Outliers
1,19611 low · 1185 high
CD8+IgL:FITC-A LOGICALinteger5,6050-740 – 8715mean 3371
Min.
-740
1st Qu.
2833
Median
3263
Mean
3370.97
3rd Qu.
3739
Max.
8715
Std. dev
891.09
Skewness
0.9512
Kurtosis
1.87
Outliers
6,287637 low · 5650 high
FSC-A LINEARinteger5,4390-2862 – 10769mean 2374
Min.
-2862
1st Qu.
1684
Median
2471
Mean
2374.35
3rd Qu.
3011
Max.
10769
Std. dev
909.803
Skewness
0.2303
Kurtosis
2.046
Outliers
782222 low · 560 high
SSC-A Exp-SSC Lowinteger7,7970-3278 – 12844mean 4100
Min.
-3278
1st Qu.
1677
Median
5043
Mean
4100.27
3rd Qu.
5908
Max.
12844
Std. dev
2107.06
Skewness
-0.2867
Kurtosis
-1.43
Outliers
10 low · 1 high
Population ID (name)factor170Neutrophils51,912Abnormal SIg Lambda13,757Monocytes9,642DEBRIS8,348CD4+CD8-7,601CD8+CD4-2,949+11 more
Neutrophils51,912Abnormal SIg Lambda13,757Monocytes9,642DEBRIS8,348CD4+CD8-7,601CD8+CD4-2,949+11 more
Levels
17
Used
17
Rows per level
Neutrophils51,912Abnormal SIg Lambda13,757Monocytes9,642DEBRIS8,348CD4+CD8-7,601CD8+CD4-2,949DOUBLETS1,879NUCLEATED CELLS1,423Basophils790CD56dim498B CELLS390CD56bright323TCRgd+196TCRgd-118CD4+CD8dim115T CELLS34PLASMA CELLS25
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.22 | 2025-10-29 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.21 | 2025-04-15 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.20 | 2024-10-29 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.19 | 2024-04-30 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.18 | 2023-10-24 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.17 | 2023-04-25 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.16 | 2022-11-01 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.15 | 2022-04-26 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.14 | 2021-10-26 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.13 | 2021-05-19 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.12 | 2020-10-27 | 100,000 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.11 | 2020-04-27 | 100,000 × 11 | – | rda · xz version 3 · 1.4 MB | exact |