Cytometry6
Cytometry6 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
50,000 × 11
Missing
0
Format
rda · bzip2
version 3 · 741 KB
File
data/Cytometry6.RData
Fingerprint
f588f910
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger4,0910-4163 – 9757mean 2195
Min.
-4163
1st Qu.
1917
Median
2110
Mean
2194.74
3rd Qu.
2304
Max.
9757
Std. dev
803.74
Skewness
3.341
Kurtosis
16.12
Outliers
5,2562468 low · 2788 high
CD38:APC H7-A LOGICALinteger5,8350-2727 – 8468mean 3093
Min.
-2727
1st Qu.
2438
Median
2942.5
Mean
3092.68
3rd Qu.
3540
Max.
8468
Std. dev
1065.34
Skewness
0.6826
Kurtosis
1.221
Outliers
2,970454 low · 2516 high
CD3:APC-A LOGICALinteger5,3610-2665 – 8168mean 3451
Min.
-2665
1st Qu.
1879
Median
2438
Mean
3451.04
3rd Qu.
6627.25
Max.
8168
Std. dev
2265.96
Skewness
0.831
Kurtosis
-0.985
CD4+CD20:PB-A LOGICALinteger6,6740-2264 – 8826mean 3308
Min.
-2264
1st Qu.
2017
Median
2722
Mean
3307.88
3rd Qu.
5427
Max.
8826
Std. dev
1744.49
Skewness
0.4834
Kurtosis
-1.03
CD45:PO-A LOGICALinteger6,1030-1590 – 11581mean 4389
Min.
-1590
1st Qu.
4146
Median
4883
Mean
4388.94
3rd Qu.
5403
Max.
11581
Std. dev
1441.05
Skewness
-1.256
Kurtosis
0.7237
Zeros
2
Outliers
6,8606798 low · 62 high
CD56+IgK:PE-A LOGICALinteger6,2480-2454 – 12549mean 2363
Min.
-2454
1st Qu.
1491
Median
2032
Mean
2362.65
3rd Qu.
2932
Max.
12549
Std. dev
1277.66
Skewness
1.207
Kurtosis
1.704
Zeros
1
Outliers
2,44418 low · 2426 high
CD5:PerCP Cy5-5-A LOGICALinteger5,3880-1990 – 10219mean 3320
Min.
-1990
1st Qu.
2176
Median
2543
Mean
3320.27
3rd Qu.
5336
Max.
10219
Std. dev
1678.34
Skewness
0.8667
Kurtosis
-0.8107
Outliers
20 low · 2 high
CD8+IgL:FITC-A LOGICALinteger6,7210-3049 – 11263mean 3224
Min.
-3049
1st Qu.
2197
Median
3108
Mean
3224.41
3rd Qu.
4005
Max.
11263
Std. dev
1402.1
Skewness
0.4876
Kurtosis
0.1614
Outliers
38449 low · 335 high
FSC-A LINEARinteger6,0570-3321 – 10258mean 2349
Min.
-3321
1st Qu.
1581
Median
2120
Mean
2349.21
3rd Qu.
3278.25
Max.
10258
Std. dev
1214.33
Skewness
0.3687
Kurtosis
0.8213
Zeros
2
Outliers
40174 low · 327 high
SSC-A Exp-SSC Lowinteger8,3120-4542 – 9599mean 2996
Min.
-4542
1st Qu.
1008
Median
2193
Mean
2995.55
3rd Qu.
5296.25
Max.
9599
Std. dev
2272.22
Skewness
0.239
Kurtosis
-1.358
Zeros
2
Population ID (name)factor300Neutrophils17,036other type of Debris11,558CD4+CD8-10,868CD56dim2,174CD8+CD4-2,070Monocytes1,581+24 more
Neutrophils17,036other type of Debris11,558CD4+CD8-10,868CD56dim2,174CD8+CD4-2,070Monocytes1,581+24 more
Levels
30
Used
30
Rows per level
Neutrophils17,036other type of Debris11,558CD4+CD8-10,868CD56dim2,174CD8+CD4-2,070Monocytes1,581Eosinophils785Mature SIg Kappa729debris neutrophils522Mature SIg Lambda469Basophils362Monocytoid DC321doublets T cells291debris T cells232doublets neutrophils190doublets eosinophils154CD56bright147debris axis109doublets NK cells69TCRgd-69other type of Doublets59doublets monocytes54CD4+CD8dim44doublets B cells30doublets axis29TCRgd+16PLASMA CELLS12Neutrophils (U.S.)10Myeloid DC6debris B cells4
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.22 | 2025-10-29 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.21 | 2025-04-15 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.20 | 2024-10-29 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.19 | 2024-04-30 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.18 | 2023-10-24 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.17 | 2023-04-25 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.16 | 2022-11-01 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.15 | 2022-04-26 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.14 | 2021-10-26 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.13 | 2021-05-19 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.12 | 2020-10-27 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 741 KB | exact |
| 3.11 | 2020-04-27 | 50,000 × 11 | – | rda · bzip2 version 3 · 741 KB | exact |