Cytometry26
Cytometry26
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
100,000 × 11
Missing
0
Format
rda · bzip2
version 3 · 1.3 MB
File
data/Cytometry26.RData
Fingerprint
8d7518b8
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger4,7950-425 – 7349mean 4083
Min.
-425
1st Qu.
2691
Median
4678
Mean
4082.66
3rd Qu.
5440
Max.
7349
Std. dev
1415.65
Skewness
-0.0143
Kurtosis
-1.766
CD38:APC H7-A LOGICALinteger3,9330-300 – 7257mean 3071
Min.
-300
1st Qu.
2806
Median
2966
Mean
3070.95
3rd Qu.
3149
Max.
7257
Std. dev
506.426
Skewness
2.319
Kurtosis
8.518
Outliers
10,9471018 low · 9929 high
CD3:APC-A LOGICALinteger5,5150-903 – 8615mean 3041
Min.
-903
1st Qu.
2030
Median
2402
Mean
3041.4
3rd Qu.
3659
Max.
8615
Std. dev
1502.33
Skewness
1.579
Kurtosis
1.792
Outliers
9,6143 low · 9611 high
CD4+CD20:PB-A LOGICALinteger6,0550-393 – 8529mean 4943
Min.
-393
1st Qu.
3462
Median
5870
Mean
4942.52
3rd Qu.
6241
Max.
8529
Std. dev
1533.76
Skewness
-0.5681
Kurtosis
-1.166
CD45:PO-A LOGICALinteger4,165029 – 8414mean 4398
Min.
29
1st Qu.
3766
Median
4663
Mean
4397.89
3rd Qu.
4908
Max.
8414
Std. dev
715.78
Skewness
-0.88
Kurtosis
0.5935
Outliers
607532 low · 75 high
CD56+IgK:PE-A LOGICALinteger5,5350-1245 – 7680mean 2549
Min.
-1245
1st Qu.
2028
Median
2462
Mean
2549.22
3rd Qu.
2943
Max.
7680
Std. dev
834.525
Skewness
1.145
Kurtosis
3.439
Zeros
1
Outliers
3,561506 low · 3055 high
CD5:PerCP Cy5-5-A LOGICALinteger5,0820-574 – 7679mean 2890
Min.
-574
1st Qu.
2444
Median
2594
Mean
2890.16
3rd Qu.
2763
Max.
7679
Std. dev
1007.52
Skewness
2.451
Kurtosis
4.98
Outliers
13,4561341 low · 12115 high
CD8+IgL:FITC-A LOGICALinteger5,0770-1148 – 8472mean 2327
Min.
-1148
1st Qu.
1855
Median
2106
Mean
2326.52
3rd Qu.
2551
Max.
8472
Std. dev
829.471
Skewness
2.582
Kurtosis
8.455
Outliers
5,668185 low · 5483 high
FSC-A LINEARinteger4,6640-3406 – 9613mean 2026
Min.
-3406
1st Qu.
1549
Median
1774
Mean
2026.26
3rd Qu.
2660
Max.
9613
Std. dev
773.176
Skewness
0.9025
Kurtosis
3.043
Zeros
1
Outliers
749283 low · 466 high
SSC-A Exp-SSC Lowinteger7,5280-3574 – 14488mean 3004
Min.
-3574
1st Qu.
1296
Median
1539
Mean
3003.78
3rd Qu.
6003
Max.
14488
Std. dev
2362.68
Skewness
0.8342
Kurtosis
-1.05
Outliers
10 low · 1 high
Population ID (name)factor180Abnormal SIg Kappa50,009Neutrophils24,855CD4+CD8-6,179DEBRIS5,379Monocytes3,767CD8+CD4-2,719+12 more
Abnormal SIg Kappa50,009Neutrophils24,855CD4+CD8-6,179DEBRIS5,379Monocytes3,767CD8+CD4-2,719+12 more
Levels
18
Used
18
Rows per level
Abnormal SIg Kappa50,009Neutrophils24,855CD4+CD8-6,179DEBRIS5,379Monocytes3,767CD8+CD4-2,719CD56dim1,859DOUBLETS1,424Eosinophils943CD56bright913TCRgd-452NUCLEATED CELLS451Basophils450Mature SIg Lambda240Mature SIg Kappa215TCRgd+100T CELLS26CD4+CD8dim19
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.22 | 2025-10-29 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.21 | 2025-04-15 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.20 | 2024-10-29 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.19 | 2024-04-30 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.18 | 2023-10-24 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.17 | 2023-04-25 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.16 | 2022-11-01 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.15 | 2022-04-26 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.14 | 2021-10-26 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.13 | 2021-05-19 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.12 | 2020-10-27 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.3 MB | exact |
| 3.11 | 2020-04-27 | 100,000 × 11 | – | rda · bzip2 version 3 · 1.3 MB | exact |