Cytometry13
Cytometry13 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
99,999 × 11
Missing
0
Format
rda · bzip2
version 3 · 1.4 MB
File
data/Cytometry13.RData
Fingerprint
8b122319
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger4,5960-484 – 11100mean 2178
Min.
-484
1st Qu.
1967
Median
2097
Mean
2178.44
3rd Qu.
2235
Max.
11100
Std. dev
569.171
Skewness
4.269
Kurtosis
26.36
Outliers
9,0242518 low · 6506 high
CD38:APC H7-A LOGICALinteger5,0190-1832 – 11411mean 2782
Min.
-1832
1st Qu.
2466
Median
2718
Mean
2782.34
3rd Qu.
2994
Max.
11411
Std. dev
626.34
Skewness
1.846
Kurtosis
10.64
Outliers
7,1581889 low · 5269 high
CD3:APC-A LOGICALinteger5,9940-525 – 9249mean 3221
Min.
-525
1st Qu.
2574.5
Median
2946
Mean
3221.27
3rd Qu.
3363
Max.
9249
Std. dev
1235.12
Skewness
1.93
Kurtosis
3.582
Outliers
10,7401093 low · 9647 high
CD4+CD20:PB-A LOGICALinteger6,0560-1599 – 10171mean 2930
Min.
-1599
1st Qu.
2475
Median
2802
Mean
2930.34
3rd Qu.
3158
Max.
10171
Std. dev
907.908
Skewness
1.49
Kurtosis
4.523
Zeros
1
Outliers
10,1672507 low · 7660 high
CD45:PO-A LOGICALinteger4,4660-479 – 9409mean 4106
Min.
-479
1st Qu.
3791
Median
4001
Mean
4106.4
3rd Qu.
4261
Max.
9409
Std. dev
640.177
Skewness
0.1748
Kurtosis
3.438
Outliers
15,2402636 low · 12604 high
CD56+IgK:PE-A LOGICALinteger6,3000-2164 – 9836mean 2519
Min.
-2164
1st Qu.
2017
Median
2372
Mean
2518.6
3rd Qu.
2776
Max.
9836
Std. dev
912.454
Skewness
1.697
Kurtosis
5.316
Zeros
1
Outliers
8,6101149 low · 7461 high
CD5:PerCP Cy5-5-A LOGICALinteger5,6250-864 – 10695mean 2429
Min.
-864
1st Qu.
1981
Median
2147
Mean
2429.27
3rd Qu.
2347
Max.
10695
Std. dev
993.83
Skewness
2.634
Kurtosis
6.433
Outliers
12,8211046 low · 11775 high
CD8+IgL:FITC-A LOGICALinteger5,8540-1907 – 9591mean 3482
Min.
-1907
1st Qu.
3054
Median
3332
Mean
3482.17
3rd Qu.
3646
Max.
9591
Std. dev
852.223
Skewness
1.74
Kurtosis
5.257
Outliers
11,1302203 low · 8927 high
FSC-A LINEARinteger6,4010-3632 – 12969mean 3989
Min.
-3632
1st Qu.
3888
Median
4244
Mean
3989.1
3rd Qu.
4518
Max.
12969
Std. dev
1000.69
Skewness
-1.388
Kurtosis
5.231
Outliers
15,85514795 low · 1060 high
SSC-A Exp-SSC Lowinteger7,1310-1105 – 10321mean 4809
Min.
-1105
1st Qu.
4780
Median
5317
Mean
4808.81
3rd Qu.
5709
Max.
10321
Std. dev
1546.17
Skewness
-1.432
Kurtosis
1.003
Outliers
17,70616918 low · 788 high
Population ID (name)factor300Neutrophils78,395CD4+CD8-3,204debris RBC2,995CD8+CD4-2,599debris monocytes1,673Monocytes1,466+24 more
Neutrophils78,395CD4+CD8-3,204debris RBC2,995CD8+CD4-2,599debris monocytes1,673Monocytes1,466+24 more
Levels
30
Used
30
Rows per level
Neutrophils78,395CD4+CD8-3,204debris RBC2,995CD8+CD4-2,599debris monocytes1,673Monocytes1,466CD56dim1,283Eosinophils1,181other type of Debris1,085debris neutrophils876TCRgd+681other type of Doublets642debris T cells594debris NK cells457PLASMA CELLS419doublets neutrophils410TCRgd-340Mature SIg Kappa302CD4+CD8dim290doublets T cells237Mature SIg Lambda228doublets eosinophils208debris B cells166debris axis106doublets axis78CD56bright47Other nucleated cells23CD4+CD8+5debris eosinophils5doublets B cells4
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.22 | 2025-10-29 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.21 | 2025-04-15 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.20 | 2024-10-29 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.19 | 2024-04-30 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.18 | 2023-10-24 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.17 | 2023-04-25 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.16 | 2022-11-01 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.15 | 2022-04-26 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.14 | 2021-10-26 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.13 | 2021-05-19 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.12 | 2020-10-27 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.11 | 2020-04-27 | 99,999 × 11 | – | rda · bzip2 version 3 · 1.4 MB | exact |