Cytometry36
Cytometry36
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
50,000 × 11
Missing
0
Format
rda · bzip2
version 3 · 714 KB
File
data/Cytometry36.RData
Fingerprint
c6a2a8b6
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger3,3340-241 – 8807mean 2929
Min.
-241
1st Qu.
2614
Median
2776
Mean
2929.42
3rd Qu.
2945
Max.
8807
Std. dev
759.387
Skewness
3.356
Kurtosis
11.42
Outliers
3,621490 low · 3131 high
CD38:APC H7-A LOGICALinteger3,9360-650 – 8159mean 3195
Min.
-650
1st Qu.
2874
Median
3037
Mean
3195.18
3rd Qu.
3251
Max.
8159
Std. dev
622.212
Skewness
2.039
Kurtosis
6.29
Outliers
7,068811 low · 6257 high
CD3:APC-A LOGICALinteger5,307044 – 9073mean 3458
Min.
44
1st Qu.
2510
Median
2988
Mean
3458.42
3rd Qu.
3540
Max.
9073
Std. dev
1631.36
Skewness
1.365
Kurtosis
0.7532
Outliers
8,119198 low · 7921 high
CD4+CD20:PB-A LOGICALinteger5,6530-33 – 8196mean 3597
Min.
-33
1st Qu.
2896
Median
3395
Mean
3597.21
3rd Qu.
4047
Max.
8196
Std. dev
1221.77
Skewness
0.7772
Kurtosis
0.3365
Outliers
4,91896 low · 4822 high
CD45:PO-A LOGICALinteger3,6920411 – 8148mean 4517
Min.
411
1st Qu.
4218
Median
4664
Mean
4516.65
3rd Qu.
5076
Max.
8148
Std. dev
795.857
Skewness
-0.9916
Kurtosis
0.6072
Outliers
4,5434474 low · 69 high
CD56+IgK:PE-A LOGICALinteger5,7490-735 – 9621mean 3512
Min.
-735
1st Qu.
2930
Median
3559
Mean
3512.05
3rd Qu.
4039
Max.
9621
Std. dev
1110.54
Skewness
0.3538
Kurtosis
0.8265
Outliers
2,077387 low · 1690 high
CD5:PerCP Cy5-5-A LOGICALinteger4,4990-939 – 8987mean 3153
Min.
-939
1st Qu.
2541
Median
2699
Mean
3152.95
3rd Qu.
2944
Max.
8987
Std. dev
1160.15
Skewness
1.831
Kurtosis
1.946
Outliers
8,785330 low · 8455 high
CD8+IgL:FITC-A LOGICALinteger5,6580-772 – 10164mean 3858
Min.
-772
1st Qu.
3382
Median
3846
Mean
3857.55
3rd Qu.
4270.25
Max.
10164
Std. dev
1112.02
Skewness
0.3349
Kurtosis
0.5725
Outliers
7,2723095 low · 4177 high
FSC-A LINEARinteger5,6060-3017 – 10482mean 2808
Min.
-3017
1st Qu.
1804
Median
3109
Mean
2808.3
3rd Qu.
3726
Max.
10482
Std. dev
1241.82
Skewness
-0.2547
Kurtosis
-0.0472
Outliers
15918 low · 141 high
SSC-A Exp-SSC Lowinteger7,4340-2501 – 11818mean 4192
Min.
-2501
1st Qu.
1514
Median
5228
Mean
4192.41
3rd Qu.
5978
Max.
11818
Std. dev
2227.94
Skewness
-0.4123
Kurtosis
-1.375
Population ID (name)factor260Neutrophils (main population)27,343CD4+CD8negativo4,289Debris RBC CD8-2,837Monocytes2,559Debris Neutrophils CD3-2,368CD8+CD4-CD5+2,155+20 more
Neutrophils (main population)27,343CD4+CD8negativo4,289Debris RBC CD8-2,837Monocytes2,559Debris Neutrophils CD3-2,368CD8+CD4-CD5+2,155+20 more
Levels
26
Used
26
Rows per level
Neutrophils (main population)27,343CD4+CD8negativo4,289Debris RBC CD8-2,837Monocytes2,559Debris Neutrophils CD3-2,368CD8+CD4-CD5+2,155Eosinophils1,573Mature SIg Kappa1,077NK CELLS1,005Debris RBC CD8+984EVENTS901Mature SIg Lambda840TCRgd+CD5+CD8-412Monocytoid DC308Basophils297CD8+CD4dim291Doublets Neutrophils196Plasmacytoid DC96CD8+CD4-CD5-82TCRgd+CD5+CD8+72Other type of debris CD5+CD8-69Doublets Eosinophils67TCRgd-CD5+60Doublets B CELLS58Doublets T cells SSC high CD8-50Doublets T cells SSC high CD8+11
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.22 | 2025-10-29 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.21 | 2025-04-15 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.20 | 2024-10-29 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.19 | 2024-04-30 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.18 | 2023-10-24 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.17 | 2023-04-25 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.16 | 2022-11-01 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.15 | 2022-04-26 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.14 | 2021-10-26 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.13 | 2021-05-19 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.12 | 2020-10-27 | 50,000 × 11 | Unchanged | rda · bzip2 version 3 · 714 KB | exact |
| 3.11 | 2020-04-27 | 50,000 × 11 | – | rda · bzip2 version 3 · 714 KB | exact |