Cytometry37
Cytometry37
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
50,000 × 11
Missing
0
Format
rda · xz
version 3 · 736 KB
File
data/Cytometry37.RData
Fingerprint
b2ad88cb
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger3,3090-278 – 7359mean 2847
Min.
-278
1st Qu.
2602
Median
2750
Mean
2847.18
3rd Qu.
2901
Max.
7359
Std. dev
612.157
Skewness
3.744
Kurtosis
16.6
Outliers
3,294716 low · 2578 high
CD38:APC H7-A LOGICALinteger4,0990-1477 – 8170mean 3231
Min.
-1477
1st Qu.
2923
Median
3101
Mean
3231.31
3rd Qu.
3327
Max.
8170
Std. dev
623.391
Skewness
1.723
Kurtosis
6.288
Outliers
6,8411165 low · 5676 high
CD3:APC-A LOGICALinteger5,4560-2457 – 9204mean 3615
Min.
-2457
1st Qu.
2629
Median
3054
Mean
3614.76
3rd Qu.
3619
Max.
9204
Std. dev
1682.56
Skewness
1.317
Kurtosis
0.482
Outliers
9,127323 low · 8804 high
CD4+CD20:PB-A LOGICALinteger5,460013 – 8291mean 3387
Min.
13
1st Qu.
2777
Median
3196
Mean
3386.76
3rd Qu.
3691
Max.
8291
Std. dev
1064.68
Skewness
1.019
Kurtosis
1.161
Outliers
5,542541 low · 5001 high
CD45:PO-A LOGICALinteger3,74701308 – 8563mean 4740
Min.
1308
1st Qu.
4480
Median
4837
Mean
4740.46
3rd Qu.
5186
Max.
8563
Std. dev
684.822
Skewness
-1.24
Kurtosis
2.096
Outliers
3,5863516 low · 70 high
CD56+IgK:PE-A LOGICALinteger5,6820-2703 – 9783mean 3795
Min.
-2703
1st Qu.
3234
Median
3905
Mean
3795.48
3rd Qu.
4459
Max.
9783
Std. dev
1093.45
Skewness
-0.2955
Kurtosis
0.4277
Outliers
1,326896 low · 430 high
CD5:PerCP Cy5-5-A LOGICALinteger4,8480-1121 – 8443mean 3218
Min.
-1121
1st Qu.
2556
Median
2719
Mean
3217.55
3rd Qu.
3009
Max.
8443
Std. dev
1219.25
Skewness
1.676
Kurtosis
1.429
Outliers
9,564327 low · 9237 high
CD8+IgL:FITC-A LOGICALinteger5,6170554 – 9884mean 4175
Min.
554
1st Qu.
3636
Median
4182
Mean
4174.81
3rd Qu.
4756
Max.
9884
Std. dev
1086.43
Skewness
-0.0329
Kurtosis
0.2953
Outliers
2,6541432 low · 1222 high
FSC-A LINEARinteger5,7860-3197 – 10693mean 2943
Min.
-3197
1st Qu.
2134
Median
3148
Mean
2943.47
3rd Qu.
3701
Max.
10693
Std. dev
1143.15
Skewness
-0.1565
Kurtosis
0.7424
Zeros
1
Outliers
39367 low · 326 high
SSC-A Exp-SSC Lowinteger7,3390-1963 – 11141mean 4524
Min.
-1963
1st Qu.
2173.75
Median
5468
Mean
4524.09
3rd Qu.
6172
Max.
11141
Std. dev
2154.41
Skewness
-0.6073
Kurtosis
-1.144
Population ID (name)factor230Neutrophils (main population)31,163CD4+CD8negativo3,582CD8+CD4-CD5+3,099Monocytes2,963Debris Neutrophils CD3-1,941Debris RBC CD8-1,543+17 more
Neutrophils (main population)31,163CD4+CD8negativo3,582CD8+CD4-CD5+3,099Monocytes2,963Debris Neutrophils CD3-1,941Debris RBC CD8-1,543+17 more
Levels
23
Used
23
Rows per level
Neutrophils (main population)31,163CD4+CD8negativo3,582CD8+CD4-CD5+3,099Monocytes2,963Debris Neutrophils CD3-1,941Debris RBC CD8-1,543TCRgd+CD5+CD8-1,007EVENTS989NK CELLS803Eosinophils495Debris RBC CD8+475Mature SIg Kappa347CD8+CD4dim289Doublets Neutrophils225Mature SIg Lambda212TCRgd+CD5+CD8+196Doublets Eosinophils181Basophils167Monocytoid DC83Doublets T cells SSC high CD8+77TCRgd-CD5+73Doublets T cells SSC high CD8-62TCRgd+CD5-CD8+28
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.22 | 2025-10-29 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.21 | 2025-04-15 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.20 | 2024-10-29 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.19 | 2024-04-30 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.18 | 2023-10-24 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.17 | 2023-04-25 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.16 | 2022-11-01 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.15 | 2022-04-26 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.14 | 2021-10-26 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.13 | 2021-05-19 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.12 | 2020-10-27 | 50,000 × 11 | Unchanged | rda · xz version 3 · 736 KB | exact |
| 3.11 | 2020-04-27 | 50,000 × 11 | – | rda · xz version 3 · 736 KB | exact |