Cytometry34
Cytometry34
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
300,000 × 11
Missing
0
Format
rda · bzip2
version 3 · 4.4 MB
File
data/Cytometry34.RData
Fingerprint
dd994304
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger6,0460-471 – 8829mean 3110
Min.
-471
1st Qu.
2610
Median
2920
Mean
3110.48
3rd Qu.
3318.25
Max.
8829
Std. dev
858.611
Skewness
1.691
Kurtosis
3.538
Outliers
27,895928 low · 26967 high
CD38:APC H7-A LOGICALinteger7,4810-442 – 10248mean 3761
Min.
-442
1st Qu.
3023
Median
3506
Mean
3761.32
3rd Qu.
4414
Max.
10248
Std. dev
1123.52
Skewness
0.7325
Kurtosis
0.7181
Zeros
1
Outliers
6,932516 low · 6416 high
CD3:APC-A LOGICALinteger8,9420-2334 – 10146mean 4097
Min.
-2334
1st Qu.
2937
Median
3745
Mean
4096.5
3rd Qu.
5407
Max.
10146
Std. dev
1700.29
Skewness
0.2197
Kurtosis
-0.6361
Zeros
2
Outliers
210180 low · 30 high
CD4+CD20:PB-A LOGICALinteger7,9830-1531 – 9445mean 3816
Min.
-1531
1st Qu.
2917
Median
3757
Mean
3816.24
3rd Qu.
4816
Max.
9445
Std. dev
1315.15
Skewness
0.0523
Kurtosis
-0.2501
Outliers
670330 low · 340 high
CD45:PO-A LOGICALinteger7,0010185 – 9991mean 4094
Min.
185
1st Qu.
3314
Median
4153
Mean
4093.85
3rd Qu.
4773
Max.
9991
Std. dev
1058.15
Skewness
0.2401
Kurtosis
0.3232
Outliers
2,949135 low · 2814 high
CD56+IgK:PE-A LOGICALinteger8,0900-1006 – 11423mean 4547
Min.
-1006
1st Qu.
3681
Median
4451
Mean
4546.59
3rd Qu.
5311
Max.
11423
Std. dev
1288.77
Skewness
0.3854
Kurtosis
0.2232
Outliers
4,365435 low · 3930 high
CD5:PerCP Cy5-5-A LOGICALinteger7,2380-1297 – 9737mean 3564
Min.
-1297
1st Qu.
2656
Median
3177
Mean
3564.41
3rd Qu.
4296
Max.
9737
Std. dev
1298.35
Skewness
0.7904
Kurtosis
-0.1161
Outliers
2,85557 low · 2798 high
CD8+IgL:FITC-A LOGICALinteger8,2980-372 – 11580mean 4582
Min.
-372
1st Qu.
3623
Median
4497
Mean
4581.97
3rd Qu.
5515
Max.
11580
Std. dev
1378.03
Skewness
0.278
Kurtosis
-0.0763
Outliers
1,758110 low · 1648 high
FSC-A LINEARinteger10,4720-5734 – 12903mean 2055
Min.
-5734
1st Qu.
778
Median
1476
Mean
2055.1
3rd Qu.
3124
Max.
12903
Std. dev
1693.74
Skewness
1.191
Kurtosis
1.605
Zeros
20
Outliers
5,80876 low · 5732 high
SSC-A Exp-SSC Lowinteger11,0860-3493 – 14111mean 2957
Min.
-3493
1st Qu.
1306
Median
2301
Mean
2957.34
3rd Qu.
4703
Max.
14111
Std. dev
2109.17
Skewness
0.673
Kurtosis
-0.4626
Zeros
13
Outliers
3710 low · 371 high
Population ID (name)factor150DEBRIS141,727Neutrophils54,319DOUBLETS48,833CD4+CD8-27,192CD8+CD4-15,382CD4+CD8dim3,065+9 more
DEBRIS141,727Neutrophils54,319DOUBLETS48,833CD4+CD8-27,192CD8+CD4-15,382CD4+CD8dim3,065+9 more
Levels
15
Used
15
Rows per level
DEBRIS141,727Neutrophils54,319DOUBLETS48,833CD4+CD8-27,192CD8+CD4-15,382CD4+CD8dim3,065NK CELLS2,600Mature SIg Kappa2,173Mature SIg Lambda1,643Abnormal SIg Kappa1,412Monocytes759MYELOID CELLS628TCRgd-93TCRgd+93EVENTS81
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.22 | 2025-10-29 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.21 | 2025-04-15 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.20 | 2024-10-29 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.19 | 2024-04-30 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.18 | 2023-10-24 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.17 | 2023-04-25 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.16 | 2022-11-01 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.15 | 2022-04-26 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.14 | 2021-10-26 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.13 | 2021-05-19 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.12 | 2020-10-27 | 300,000 × 11 | Unchanged | rda · bzip2 version 3 · 4.4 MB | exact |
| 3.11 | 2020-04-27 | 300,000 × 11 | – | rda · bzip2 version 3 · 4.4 MB | exact |