Cytometry11
Cytometry11 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
99,999 × 11
Missing
0
Format
rda · xz
version 3 · 1.4 MB
File
data/Cytometry11.RData
Fingerprint
ae77fad5
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger5,9240-744 – 9996mean 2615
Min.
-744
1st Qu.
2163
Median
2438
Mean
2615.17
3rd Qu.
2736
Max.
9996
Std. dev
930.749
Skewness
2.435
Kurtosis
7.369
Outliers
9,9251530 low · 8395 high
CD38:APC H7-A LOGICALinteger5,5390-671 – 10326mean 2785
Min.
-671
1st Qu.
2339
Median
2614
Mean
2784.78
3rd Qu.
3003
Max.
10326
Std. dev
801.634
Skewness
1.736
Kurtosis
6.353
Outliers
9,4841346 low · 8138 high
CD3:APC-A LOGICALinteger7,0970-1132 – 9877mean 3937
Min.
-1132
1st Qu.
2927
Median
3366
Mean
3936.62
3rd Qu.
4175
Max.
9877
Std. dev
1656.27
Skewness
0.9515
Kurtosis
-0.2577
Outliers
20,933642 low · 20291 high
CD4+CD20:PB-A LOGICALinteger6,7520-1245 – 12938mean 3767
Min.
-1245
1st Qu.
3326
Median
3610
Mean
3766.69
3rd Qu.
4006
Max.
12938
Std. dev
1143.85
Skewness
0.3545
Kurtosis
1.3
Outliers
23,5858557 low · 15028 high
CD45:PO-A LOGICALinteger4,9390-292 – 10877mean 4538
Min.
-292
1st Qu.
4135
Median
4340
Mean
4538.14
3rd Qu.
5217
Max.
10877
Std. dev
753.898
Skewness
-0.483
Kurtosis
2.915
Outliers
2,2952085 low · 210 high
CD56+IgK:PE-A LOGICALinteger7,4900-3335 – 12374mean 2958
Min.
-3335
1st Qu.
2287
Median
2705
Mean
2958.5
3rd Qu.
3215
Max.
12374
Std. dev
1233.14
Skewness
1.318
Kurtosis
2.683
Zeros
1
Outliers
13,6971534 low · 12163 high
CD5:PerCP Cy5-5-A LOGICALinteger6,5560-1476 – 10234mean 2997
Min.
-1476
1st Qu.
2199
Median
2460
Mean
2996.8
3rd Qu.
3102
Max.
10234
Std. dev
1344.52
Skewness
1.348
Kurtosis
0.7518
Outliers
18,607469 low · 18138 high
CD8+IgL:FITC-A LOGICALinteger6,6230-2693 – 11851mean 4004
Min.
-2693
1st Qu.
3541
Median
3847
Mean
4004.48
3rd Qu.
4220
Max.
11851
Std. dev
1092.29
Skewness
0.8567
Kurtosis
1.962
Outliers
20,2967486 low · 12810 high
FSC-A LINEARinteger7,4280-2294 – 15472mean 3981
Min.
-2294
1st Qu.
2620.5
Median
4533
Mean
3980.86
3rd Qu.
5014
Max.
15472
Std. dev
1451.21
Skewness
-0.469
Kurtosis
0.3446
Zeros
1
Outliers
26614 low · 252 high
SSC-A Exp-SSC Lowinteger7,4550-1771 – 14451mean 3721
Min.
-1771
1st Qu.
1532
Median
4511
Mean
3721.14
3rd Qu.
5073
Max.
14451
Std. dev
1807.69
Skewness
-0.4342
Kurtosis
-0.9925
Zeros
1
Outliers
350 low · 35 high
Population ID (name)factor300Neutrophils59,161CD4+CD8-8,829CD8+CD4-6,027debris RBC3,820Monocytes3,074debris monocytes2,179+24 more
Neutrophils59,161CD4+CD8-8,829CD8+CD4-6,027debris RBC3,820Monocytes3,074debris monocytes2,179+24 more
Levels
30
Used
30
Rows per level
Neutrophils59,161CD4+CD8-8,829CD8+CD4-6,027debris RBC3,820Monocytes3,074debris monocytes2,179CD56dim2,033other type of Debris1,953Mature SIg Kappa1,587debris T cells1,419Eosinophils1,210doublets T cells1,137TCRgd+1,059Mature SIg Lambda1,055debris NK cells888doublets neutrophils778debris axis688other type of Doublets522TCRgd-494CD4+CD8dim491debris neutrophils401doublets eosinophils394debris B cells388CD56bright171doublets axis91Other nucleated cells54PLASMA CELLS39CD4+CD8+27debris eosinophils20doublets B cells10
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.22 | 2025-10-29 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.21 | 2025-04-15 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.20 | 2024-10-29 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.19 | 2024-04-30 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.18 | 2023-10-24 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.17 | 2023-04-25 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.16 | 2022-11-01 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.15 | 2022-04-26 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.14 | 2021-10-26 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.13 | 2021-05-19 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.12 | 2020-10-27 | 99,999 × 11 | Unchanged | rda · xz version 3 · 1.4 MB | exact |
| 3.11 | 2020-04-27 | 99,999 × 11 | – | rda · xz version 3 · 1.4 MB | exact |