Cytometry12
Cytometry12 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
99,999 × 11
Missing
0
Format
rda · bzip2
version 3 · 1.4 MB
File
data/Cytometry12.RData
Fingerprint
fe796d3f
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger5,6600-1790 – 11631mean 2466
Min.
-1790
1st Qu.
2099
Median
2348
Mean
2466.49
3rd Qu.
2606
Max.
11631
Std. dev
814.319
Skewness
2.682
Kurtosis
10.8
Outliers
9,3212433 low · 6888 high
CD38:APC H7-A LOGICALinteger5,8500-1284 – 11863mean 3030
Min.
-1284
1st Qu.
2584
Median
2906
Mean
3030.33
3rd Qu.
3302
Max.
11863
Std. dev
835.432
Skewness
1.068
Kurtosis
4.216
Outliers
9,9312211 low · 7720 high
CD3:APC-A LOGICALinteger6,9260-1398 – 9946mean 3785
Min.
-1398
1st Qu.
2919
Median
3340
Mean
3785.17
3rd Qu.
3909
Max.
9946
Std. dev
1522.9
Skewness
1.114
Kurtosis
0.3979
Outliers
18,8851724 low · 17161 high
CD4+CD20:PB-A LOGICALinteger6,6210-2156 – 13990mean 3817
Min.
-2156
1st Qu.
3446
Median
3684
Mean
3817.16
3rd Qu.
4000
Max.
13990
Std. dev
1030.46
Skewness
0.3034
Kurtosis
2.155
Outliers
22,2508048 low · 14202 high
CD45:PO-A LOGICALinteger4,4780-565 – 9234mean 4571
Min.
-565
1st Qu.
4250
Median
4472
Mean
4571.04
3rd Qu.
5051
Max.
9234
Std. dev
633.449
Skewness
-1.08
Kurtosis
6.11
Outliers
2,3492163 low · 186 high
CD56+IgK:PE-A LOGICALinteger7,0170-3114 – 11536mean 2733
Min.
-3114
1st Qu.
2121
Median
2522
Mean
2733.05
3rd Qu.
3011
Max.
11536
Std. dev
1117.46
Skewness
1.38
Kurtosis
3.441
Zeros
1
Outliers
12,2911559 low · 10732 high
CD5:PerCP Cy5-5-A LOGICALinteger6,2570-3132 – 10600mean 2907
Min.
-3132
1st Qu.
2185
Median
2432
Mean
2907.33
3rd Qu.
2871
Max.
10600
Std. dev
1278.17
Skewness
1.502
Kurtosis
1.234
Outliers
18,258931 low · 17327 high
CD8+IgL:FITC-A LOGICALinteger6,3970-1296 – 10860mean 3943
Min.
-1296
1st Qu.
3610
Median
3869
Mean
3943.47
3rd Qu.
4164
Max.
10860
Std. dev
977.246
Skewness
0.6296
Kurtosis
2.94
Outliers
20,8569721 low · 11135 high
FSC-A LINEARinteger7,3020-2103 – 13979mean 4100
Min.
-2103
1st Qu.
3072.5
Median
4538
Mean
4099.83
3rd Qu.
5043
Max.
13979
Std. dev
1383.21
Skewness
-0.6045
Kurtosis
0.1435
Zeros
1
Outliers
537256 low · 281 high
SSC-A Exp-SSC Lowinteger7,6210-3318 – 12126mean 4261
Min.
-3318
1st Qu.
2919
Median
5005
Mean
4260.83
3rd Qu.
5542
Max.
12126
Std. dev
1874.8
Skewness
-0.7943
Kurtosis
-0.6896
Zeros
2
Outliers
3512 low · 23 high
Population ID (name)factor290Neutrophils62,770CD4+CD8-8,765CD8+CD4-3,956Monocytes3,621Eosinophils3,022doublets neutrophils2,959+23 more
Neutrophils62,770CD4+CD8-8,765CD8+CD4-3,956Monocytes3,621Eosinophils3,022doublets neutrophils2,959+23 more
Levels
29
Used
29
Rows per level
Neutrophils62,770CD4+CD8-8,765CD8+CD4-3,956Monocytes3,621Eosinophils3,022doublets neutrophils2,959debris RBC2,433debris neutrophils1,839CD56dim1,809other type of Debris1,241debris T cells1,153Mature SIg Kappa1,082doublets T cells931Mature SIg Lambda737doublets monocytes698debris monocytes463debris B cells455CD4+CD8dim419TCRgd+358TCRgd-341other type of Doublets272debris axis236doublets eosinophils230CD56bright66PLASMA CELLS58debris NK cells43Other nucleated cells26CD4+CD8+11doublets B cells5
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.22 | 2025-10-29 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.21 | 2025-04-15 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.20 | 2024-10-29 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.19 | 2024-04-30 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.18 | 2023-10-24 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.17 | 2023-04-25 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.16 | 2022-11-01 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.15 | 2022-04-26 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.14 | 2021-10-26 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.13 | 2021-05-19 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.12 | 2020-10-27 | 99,999 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.11 | 2020-04-27 | 99,999 × 11 | – | rda · bzip2 version 3 · 1.4 MB | exact |