Cytometry38
Cytometry38
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
50,000 × 11
Missing
0
Format
rda · xz
version 3 · 714 KB
File
data/Cytometry38.RData
Fingerprint
c9deb8bd
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger2,7480-1684 – 8190mean 2770
Min.
-1684
1st Qu.
2566
Median
2713
Mean
2769.9
3rd Qu.
2860
Max.
8190
Std. dev
521.955
Skewness
4.542
Kurtosis
27.12
Outliers
2,365764 low · 1601 high
CD38:APC H7-A LOGICALinteger4,3780-1948 – 10216mean 3331
Min.
-1948
1st Qu.
2955
Median
3133
Mean
3330.9
3rd Qu.
3406.25
Max.
10216
Std. dev
724.77
Skewness
1.777
Kurtosis
5.111
Outliers
7,766887 low · 6879 high
CD3:APC-A LOGICALinteger5,2520-1956 – 11518mean 3467
Min.
-1956
1st Qu.
2402
Median
2931
Mean
3466.54
3rd Qu.
3489.25
Max.
11518
Std. dev
1794.84
Skewness
1.229
Kurtosis
0.2818
Outliers
9,336207 low · 9129 high
CD4+CD20:PB-A LOGICALinteger5,4770-583 – 9073mean 3566
Min.
-583
1st Qu.
2953
Median
3406
Mean
3566.34
3rd Qu.
3939
Max.
9073
Std. dev
1193.82
Skewness
0.6325
Kurtosis
0.3484
Outliers
8,2081160 low · 7048 high
CD45:PO-A LOGICALinteger3,7640813 – 9918mean 4228
Min.
813
1st Qu.
3790
Median
4105
Mean
4228.43
3rd Qu.
4887
Max.
9918
Std. dev
757.345
Skewness
-0.0329
Kurtosis
0.3965
Outliers
14641 low · 105 high
CD56+IgK:PE-A LOGICALinteger5,4520-1847 – 10822mean 2783
Min.
-1847
1st Qu.
2169
Median
2595
Mean
2782.84
3rd Qu.
3084
Max.
10822
Std. dev
1017.11
Skewness
1.333
Kurtosis
2.966
Outliers
4,056209 low · 3847 high
CD5:PerCP Cy5-5-A LOGICALinteger4,6060-2008 – 10454mean 3224
Min.
-2008
1st Qu.
2546
Median
2671
Mean
3224.24
3rd Qu.
2894
Max.
10454
Std. dev
1273.15
Skewness
1.669
Kurtosis
1.294
Outliers
10,462338 low · 10124 high
CD8+IgL:FITC-A LOGICALinteger5,6260-913 – 9641mean 3274
Min.
-913
1st Qu.
2615
Median
3038
Mean
3274.01
3rd Qu.
3597
Max.
9641
Std. dev
1116.86
Skewness
1.139
Kurtosis
1.293
Outliers
4,318121 low · 4197 high
FSC-A LINEARinteger5,4160-6389 – 14010mean 2746
Min.
-6389
1st Qu.
1760
Median
3036
Mean
2745.87
3rd Qu.
3571
Max.
14010
Std. dev
1172.69
Skewness
0.0027
Kurtosis
2.464
Outliers
29739 low · 258 high
SSC-A Exp-SSC Lowinteger6,8580-3805 – 14448mean 3934
Min.
-3805
1st Qu.
1348
Median
5121
Mean
3934.01
3rd Qu.
5793
Max.
14448
Std. dev
2209.62
Skewness
-0.3095
Kurtosis
-1.46
Zeros
2
Outliers
90 low · 9 high
Population ID (name)factor240Neutrophils (main population)25,991CD4+CD8negativo5,908Monocytes3,974Debris RBC CD8-3,909NK CELLS2,387CD8+CD4-CD5+2,122+18 more
Neutrophils (main population)25,991CD4+CD8negativo5,908Monocytes3,974Debris RBC CD8-3,909NK CELLS2,387CD8+CD4-CD5+2,122+18 more
Levels
24
Used
24
Rows per level
Neutrophils (main population)25,991CD4+CD8negativo5,908Monocytes3,974Debris RBC CD8-3,909NK CELLS2,387CD8+CD4-CD5+2,122Eosinophils1,551Monocytoid DC808EVENTS681Basophils405CD8+CD4dim393Mature SIg Kappa353Mature SIg Lambda346Debris Neutrophils CD3-253Plasmacytoid DC202Doublets Eosinophils165TCRgd+CD5+CD8-153Doublets Neutrophils138Doublets T cells SSC high CD8-89TCRgd-CD5+67Myeloid DC53PC SIg Lambda20Doublets T cells SSC high CD8+17PC SIg Kappa15
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.22 | 2025-10-29 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.21 | 2025-04-15 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.20 | 2024-10-29 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.19 | 2024-04-30 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.18 | 2023-10-24 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.17 | 2023-04-25 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.16 | 2022-11-01 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.15 | 2022-04-26 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.14 | 2021-10-26 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.13 | 2021-05-19 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.12 | 2020-10-27 | 50,000 × 11 | Unchanged | rda · xz version 3 · 714 KB | exact |
| 3.11 | 2020-04-27 | 50,000 × 11 | – | rda · xz version 3 · 714 KB | exact |