Cytometry23
Cytometry23
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
100,000 × 11
Missing
0
Format
rda · bzip2
version 3 · 1.4 MB
File
data/Cytometry23.RData
Fingerprint
532b0ea4
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger5,5460164 – 9414mean 4581
Min.
164
1st Qu.
4047
Median
4796
Mean
4581.48
3rd Qu.
5335.25
Max.
9414
Std. dev
1077.99
Skewness
-0.6228
Kurtosis
-0.2078
Outliers
1,1911145 low · 46 high
CD38:APC H7-A LOGICALinteger3,8950356 – 7242mean 3353
Min.
356
1st Qu.
3024
Median
3315
Mean
3352.83
3rd Qu.
3655
Max.
7242
Std. dev
530.258
Skewness
0.678
Kurtosis
2.977
Outliers
2,481679 low · 1802 high
CD3:APC-A LOGICALinteger5,4880-1781 – 9750mean 3354
Min.
-1781
1st Qu.
2839
Median
3230
Mean
3353.88
3rd Qu.
3679
Max.
9750
Std. dev
899.071
Skewness
1.85
Kurtosis
5.805
Outliers
4,851490 low · 4361 high
CD4+CD20:PB-A LOGICALinteger6,4510-2736 – 9583mean 5577
Min.
-2736
1st Qu.
5258
Median
5880
Mean
5577.37
3rd Qu.
6348
Max.
9583
Std. dev
1212.8
Skewness
-1.268
Kurtosis
1.253
Outliers
11,81411695 low · 119 high
CD45:PO-A LOGICALinteger4,3590-514 – 9403mean 4467
Min.
-514
1st Qu.
4136
Median
4489
Mean
4466.8
3rd Qu.
4842
Max.
9403
Std. dev
597.27
Skewness
-0.6647
Kurtosis
3.437
Outliers
2,6522121 low · 531 high
CD56+IgK:PE-A LOGICALinteger6,2940-3022 – 9557mean 4029
Min.
-3022
1st Qu.
3372
Median
4053
Mean
4028.76
3rd Qu.
4723
Max.
9557
Std. dev
1038.74
Skewness
-0.284
Kurtosis
0.7875
Zeros
1
Outliers
1,4231108 low · 315 high
CD5:PerCP Cy5-5-A LOGICALinteger4,9430-280 – 8623mean 3134
Min.
-280
1st Qu.
2697
Median
3059
Mean
3133.82
3rd Qu.
3477
Max.
8623
Std. dev
689.958
Skewness
1.284
Kurtosis
4.388
Outliers
3,213378 low · 2835 high
CD8+IgL:FITC-A LOGICALinteger5,5740-1641 – 9205mean 3158
Min.
-1641
1st Qu.
2640
Median
3026
Mean
3158.29
3rd Qu.
3483
Max.
9205
Std. dev
844.151
Skewness
1.174
Kurtosis
2.856
Outliers
6,058577 low · 5481 high
FSC-A LINEARinteger4,8230-2540 – 9030mean 1644
Min.
-2540
1st Qu.
1297
Median
1539
Mean
1643.79
3rd Qu.
1809
Max.
9030
Std. dev
658.792
Skewness
2.153
Kurtosis
10.83
Outliers
9,8761536 low · 8340 high
SSC-A Exp-SSC Lowinteger7,3540-4496 – 15068mean 2336
Min.
-4496
1st Qu.
1512
Median
1857
Mean
2336.02
3rd Qu.
2282
Max.
15068
Std. dev
1597.38
Skewness
2.137
Kurtosis
3.809
Zeros
1
Outliers
13,142346 low · 12796 high
Population ID (name)factor160Abnormal SIg Kappa80,070Neutrophils7,590DEBRIS4,776CD8+CD4-1,958DOUBLETS1,312NUCLEATED CELLS1,300+10 more
Abnormal SIg Kappa80,070Neutrophils7,590DEBRIS4,776CD8+CD4-1,958DOUBLETS1,312NUCLEATED CELLS1,300+10 more
Levels
16
Used
16
Rows per level
Abnormal SIg Kappa80,070Neutrophils7,590DEBRIS4,776CD8+CD4-1,958DOUBLETS1,312NUCLEATED CELLS1,300Monocytes1,040CD4+CD8-854CD56dim316Eosinophils231CD56bright230Basophils135TCRgd-80T CELLS46TCRgd+39CD4+CD8dim23
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.22 | 2025-10-29 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.21 | 2025-04-15 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.20 | 2024-10-29 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.19 | 2024-04-30 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.18 | 2023-10-24 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.17 | 2023-04-25 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.16 | 2022-11-01 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.15 | 2022-04-26 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.14 | 2021-10-26 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.13 | 2021-05-19 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.12 | 2020-10-27 | 100,000 × 11 | Unchanged | rda · bzip2 version 3 · 1.4 MB | exact |
| 3.11 | 2020-04-27 | 100,000 × 11 | – | rda · bzip2 version 3 · 1.4 MB | exact |