Cytometry32
Cytometry32
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
260,598 × 11
Missing
0
Format
rda · bzip2
version 3 · 3.5 MB
File
data/Cytometry32.RData
Fingerprint
1b96aaa1
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger4,9350-1223 – 9919mean 2859
Min.
-1223
1st Qu.
2590
Median
2708
Mean
2859.04
3rd Qu.
2828
Max.
9919
Std. dev
758.171
Skewness
3.451
Kurtosis
11.91
Outliers
26,8048768 low · 18036 high
CD38:APC H7-A LOGICALinteger5,3130-3229 – 10972mean 3228
Min.
-3229
1st Qu.
2977
Median
3156
Mean
3228.17
3rd Qu.
3352
Max.
10972
Std. dev
538.812
Skewness
2.1
Kurtosis
12.71
Outliers
29,4567693 low · 21763 high
CD3:APC-A LOGICALinteger6,3920-1295 – 11604mean 4173
Min.
-1295
1st Qu.
3269
Median
3602
Mean
4172.64
3rd Qu.
4107
Max.
11604
Std. dev
1600.09
Skewness
1.07
Kurtosis
-0.1711
Outliers
61,8636595 low · 55268 high
CD4+CD20:PB-A LOGICALinteger6,4330-979 – 10561mean 3584
Min.
-979
1st Qu.
2929
Median
3275
Mean
3584.07
3rd Qu.
3889
Max.
10561
Std. dev
1195.76
Skewness
0.8864
Kurtosis
0.3103
Outliers
46,2312971 low · 43260 high
CD45:PO-A LOGICALinteger3,9050-470 – 9688mean 4306
Min.
-470
1st Qu.
3877
Median
4167
Mean
4306.11
3rd Qu.
4908
Max.
9688
Std. dev
660.523
Skewness
0.0346
Kurtosis
0.1245
Outliers
343149 low · 194 high
CD56+IgK:PE-A LOGICALinteger6,9020-393 – 10424mean 4135
Min.
-393
1st Qu.
3595
Median
4225
Mean
4135.05
3rd Qu.
4676
Max.
10424
Std. dev
1113.11
Skewness
0.0926
Kurtosis
0.3935
Outliers
14,6795861 low · 8818 high
CD5:PerCP Cy5-5-A LOGICALinteger6,2080-1161 – 8768mean 3327
Min.
-1161
1st Qu.
2525
Median
2676
Mean
3327.06
3rd Qu.
3013
Max.
8768
Std. dev
1399.71
Skewness
1.367
Kurtosis
0.2006
Outliers
59,1521873 low · 57279 high
CD8+IgL:FITC-A LOGICALinteger6,1630-177 – 9593mean 3739
Min.
-177
1st Qu.
3282
Median
3687
Mean
3739.15
3rd Qu.
4083
Max.
9593
Std. dev
1054.67
Skewness
0.5351
Kurtosis
0.7092
Outliers
41,61117017 low · 24594 high
FSC-A LINEARinteger6,8690-4640 – 12421mean 2905
Min.
-4640
1st Qu.
1950
Median
3195
Mean
2905.22
3rd Qu.
3631
Max.
12421
Std. dev
1041.43
Skewness
-0.2279
Kurtosis
0.8609
Zeros
5
Outliers
1,786197 low · 1589 high
SSC-A Exp-SSC Lowinteger8,0540-4751 – 12172mean 3991
Min.
-4751
1st Qu.
1348
Median
5024
Mean
3991.08
3rd Qu.
5601
Max.
12172
Std. dev
2058.65
Skewness
-0.523
Kurtosis
-1.371
Zeros
2
Outliers
10 low · 1 high
Population ID (name)factor350Neutrophils (main population)160,069CD4+CD8negativo32,800CD8+CD4-CD5+12,593Monocytes12,459Debris RBC CD8-6,591Mature SIg Kappa5,827+29 more
Neutrophils (main population)160,069CD4+CD8negativo32,800CD8+CD4-CD5+12,593Monocytes12,459Debris RBC CD8-6,591Mature SIg Kappa5,827+29 more
Levels
35
Used
35
Rows per level
Neutrophils (main population)160,069CD4+CD8negativo32,800CD8+CD4-CD5+12,593Monocytes12,459Debris RBC CD8-6,591Mature SIg Kappa5,827NK CELLS5,694TCRgd+CD5+CD8-3,877Mature SIg Lambda3,836CD8+CD4dim3,199Monocytoid DC1,871EVENTS1,793Doublets Eosinophils1,741Eosinophils1,536Debris RBC CD8+1,381Basophils1,039TCRgd+CD5+CD8+607Other type of debris CD5+CD8-565Neutrophils (unspecific staining)519Debris Neutrophils CD3-399TCRgd-CD5+378Plasmacytoid DC272Doublets T cells SSC high CD8-266Other type of debris CD5+CD8+199CD4+CD8dim194Doublets T cells SSC high CD8+180Myeloid DC175Doublets B CELLS128Doublets T cells TCRgd-85PC SIg Kappa72Other type of debris CD5+++CD8-CD38+70Doublets Neutrophils60CD8+CD4-CD5-58PC SIg Lambda36DOublets T cells TCRgd+29
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry40optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.22 | 2025-10-29 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.21 | 2025-04-15 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.20 | 2024-10-29 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.19 | 2024-04-30 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.18 | 2023-10-24 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.17 | 2023-04-25 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.16 | 2022-11-01 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.15 | 2022-04-26 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.14 | 2021-10-26 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.13 | 2021-05-19 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.12 | 2020-10-27 | 260,598 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.11 | 2020-04-27 | 260,598 × 11 | – | rda · bzip2 version 3 · 3.5 MB | exact |