Cytometry40
Cytometry40
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
145,075 × 11
Missing
0
Format
rda · xz
version 3 · 2.1 MB
File
data/Cytometry40.RData
Fingerprint
5762f017
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger5,6870-867 – 7807mean 2801
Min.
-867
1st Qu.
2506
Median
2679
Mean
2801.34
3rd Qu.
2866
Max.
7807
Std. dev
738.133
Skewness
2.834
Kurtosis
10.33
Outliers
16,2575230 low · 11027 high
CD38:APC H7-A LOGICALinteger4,7890-1634 – 8723mean 3366
Min.
-1634
1st Qu.
3044
Median
3311
Mean
3365.77
3rd Qu.
3596
Max.
8723
Std. dev
585.33
Skewness
1.213
Kurtosis
5.335
Outliers
9,6692376 low · 7293 high
CD3:APC-A LOGICALinteger6,5630-1607 – 10776mean 3976
Min.
-1607
1st Qu.
2803
Median
3236
Mean
3976.08
3rd Qu.
6320
Max.
10776
Std. dev
1782.53
Skewness
0.8025
Kurtosis
-0.8514
CD4+CD20:PB-A LOGICALinteger6,7800-2170 – 10488mean 3555
Min.
-2170
1st Qu.
2874
Median
3295
Mean
3554.76
3rd Qu.
3973
Max.
10488
Std. dev
1199.49
Skewness
0.6759
Kurtosis
0.2532
Outliers
13,0541789 low · 11265 high
CD45:PO-A LOGICALinteger4,5670-1297 – 9218mean 4459
Min.
-1297
1st Qu.
3992
Median
4351
Mean
4459.46
3rd Qu.
5000
Max.
9218
Std. dev
674.151
Skewness
0.0004
Kurtosis
0.8431
Outliers
1,157875 low · 282 high
CD56+IgK:PE-A LOGICALinteger7,0070-1714 – 8825mean 3626
Min.
-1714
1st Qu.
3014
Median
3668
Mean
3625.92
3rd Qu.
4189
Max.
8825
Std. dev
1080.57
Skewness
0.1882
Kurtosis
0.8917
Outliers
5,5881856 low · 3732 high
CD5:PerCP Cy5-5-A LOGICALinteger6,7490-1525 – 9005mean 3538
Min.
-1525
1st Qu.
2518
Median
2852
Mean
3537.83
3rd Qu.
4494.5
Max.
9005
Std. dev
1539.08
Skewness
1.058
Kurtosis
-0.334
Outliers
2998 low · 291 high
CD8+IgL:FITC-A LOGICALinteger6,7780-697 – 9516mean 3902
Min.
-697
1st Qu.
3269
Median
3782
Mean
3901.7
3rd Qu.
4355
Max.
9516
Std. dev
1234.55
Skewness
0.3759
Kurtosis
0.2995
Outliers
19,8654739 low · 15126 high
FSC-A LINEARinteger5,4420-3200 – 9870mean 2812
Min.
-3200
1st Qu.
1878
Median
3054
Mean
2812.2
3rd Qu.
3595
Max.
9870
Std. dev
979.908
Skewness
-0.249
Kurtosis
-0.4354
Zeros
1
Outliers
18873 low · 115 high
SSC-A Exp-SSC Lowinteger7,5920-4637 – 11169mean 3967
Min.
-4637
1st Qu.
1489
Median
5024
Mean
3967.13
3rd Qu.
5696
Max.
11169
Std. dev
2098.53
Skewness
-0.3428
Kurtosis
-1.543
Population ID (name)factor310Neutrophils (main population)81,380CD4+CD8negativo18,544CD8+CD4-CD5+14,836Monocytes4,927NK CELLS4,531Eosinophils3,348+25 more
Neutrophils (main population)81,380CD4+CD8negativo18,544CD8+CD4-CD5+14,836Monocytes4,927NK CELLS4,531Eosinophils3,348+25 more
Levels
31
Used
31
Rows per level
Neutrophils (main population)81,380CD4+CD8negativo18,544CD8+CD4-CD5+14,836Monocytes4,927NK CELLS4,531Eosinophils3,348Mature SIg Kappa3,141EVENTS2,871Debris RBC CD8+2,466Mature SIg Lambda2,077CD8+CD4-CD5-981Monocytoid DC899Debris Neutrophils CD3-862CD4+CD8dim840Basophils694TCRgd+CD5+CD8-612TCRgd+CD5-CD8-395TCRgd-CD5+281TCRgd+CD5+CD8+273Plasmacytoid DC204Doublets T cells TCRgd-202TCRgd+CD5-CD8+157Other type of debris CD5+++CD8-CD38+111Doublets Eosinophils92DOublets T cells TCRgd+73Doublets T cells SSC high CD8+67Doublets T cells SSC high CD8-62Other type of debris CD5+CD8+53Myeloid DC47PC SIg Lambda35PC SIg Kappa14
Same structure in 31 other datasets
These datasets share the same columns and types but hold different data.
optimalFlowDataCytometry1optimalFlowDataCytometry10optimalFlowDataCytometry11optimalFlowDataCytometry12optimalFlowDataCytometry13optimalFlowDataCytometry2optimalFlowDataCytometry22optimalFlowDataCytometry23optimalFlowDataCytometry24optimalFlowDataCytometry25optimalFlowDataCytometry26optimalFlowDataCytometry27optimalFlowDataCytometry28optimalFlowDataCytometry29optimalFlowDataCytometry3optimalFlowDataCytometry30optimalFlowDataCytometry31optimalFlowDataCytometry32optimalFlowDataCytometry33optimalFlowDataCytometry34optimalFlowDataCytometry35optimalFlowDataCytometry36optimalFlowDataCytometry37optimalFlowDataCytometry38optimalFlowDataCytometry39optimalFlowDataCytometry4optimalFlowDataCytometry5optimalFlowDataCytometry6optimalFlowDataCytometry7optimalFlowDataCytometry8optimalFlowDataCytometry9
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.22 | 2025-10-29 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.21 | 2025-04-15 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.20 | 2024-10-29 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.19 | 2024-04-30 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.18 | 2023-10-24 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.17 | 2023-04-25 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.16 | 2022-11-01 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.15 | 2022-04-26 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.14 | 2021-10-26 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.13 | 2021-05-19 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.12 | 2020-10-27 | 145,075 × 11 | Unchanged | rda · xz version 3 · 2.1 MB | exact |
| 3.11 | 2020-04-27 | 145,075 × 11 | – | rda · xz version 3 · 2.1 MB | exact |