readxl

compiled code

File ‘readxl/libs/readxl.so’:
  Found non-API call to R: ‘R_NamespaceRegistry’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building ‘cell-and-column-types.Rmd’ using rmarkdown

 *** caught segfault ***
address (nil), cause 'memory not mapped'

Traceback:
 1: read_fun(path = path, sheet_i = sheet, limits = limits, shim = shim,     col_names = col_names, col_types = col_types, na = na, trim_ws = trim_ws,     guess_max = guess_max, progress = progress)
 2: tibble::as_tibble(l, .name_repair = .name_repair)
 3: set_readxl_names(read_fun(path = path, sheet_i = sheet, limits = limits,     shim = shim, col_names = col_names, col_types = col_types,     na = na, trim_ws = trim_ws, guess_max = guess_max, progress = progress),     .name_repair = .name_repair)
 4: read_excel_(path = path, sheet = sheet, range = range, col_names = col_names,     col_types = col_types, na = na, trim_ws = trim_ws, skip = skip,     n_max = n_max, guess_max = guess_max, progress = progress,     .name_repair = .name_repair, format = format)
 5: read_excel(readxl_example("type-me.xlsx"), sheet = "logi
...[truncated]...
setwd(startdir)    output <- find_vignette_product(name, by = "weave", engine = engine)    if (!have.makefile && vignette_is_tex(output)) {        texi2pdf(file = output, clean = FALSE, quiet = quiet)        output <- find_vignette_product(name, by = "texi2pdf",             engine = engine)    }}, error = function(e) {    OK <<- FALSE    message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s",         file, conditionMessage(e)))})
40: tools:::.buildOneVignette("cell-and-column-types.Rmd", "/data/gannet/ripley/R/packages/tests-clang/readxl.Rcheck/vign_test/readxl",     TRUE, FALSE, "cell-and-column-types", "UTF-8", "/tmp/RtmpZbuK2p/working_dir/Rtmp3dtAk4/file2c3af4711923be.rds")
An irrecoverable exception occurred. R is aborting now ...
--- re-building ‘sheet-geometry.Rmd’ using rmarkdown
--- finished re-building ‘sheet-geometry.Rmd’

SUMMARY: processing the following file failed:
  ‘cell-and-column-types.Rmd’

Error: Vignette re-building failed.
Execution halted

tests

Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(readxl)
  > 
  > test_check("readxl")
  
   *** caught segfault ***
  address (nil), cause 'memory not mapped'
  
  Traceback:
   1: read_fun(path = path, sheet_i = sheet, limits = limits, shim = shim,     col_names = col_names, col_types = col_types, na = na, trim_ws = trim_ws,     guess_max = guess_max, progress = progress)
   2: tibble::as_tibble(l, .name_repair = .name_repair)
   3: set_readxl_names(read_fun(path = path, sheet_i = sheet, limits = limits,     shim = shim, col_names = col_names, col_types = col_types,     na = na, trim_ws = trim_ws, guess_max = guess_max, progress = progress),     .name_repair = .name_repair)
   4: read_excel_(path = path, sheet = sheet, range = range, col_names = col_names,     col_types = col_types, na = na, trim_ws = trim_ws, skip = skip,     n_max = n_max, guess_max = guess_max, progress = progress,     .name_repair = .name_repa
...[truncated]...
onditionMessage(cnd), "\n")    NULL})
  55: with_reporter(reporters$multi, lapply(test_paths, test_one_file,     env = env, desc = desc, shuffle = shuffle, error_call = error_call))
  56: test_files_serial(test_dir = test_dir, test_package = test_package,     test_paths = test_paths, load_helpers = load_helpers, reporter = reporter,     env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,     desc = desc, load_package = load_package, shuffle = shuffle,     error_call = error_call)
  57: test_files(test_dir = path, test_paths = test_paths, test_package = package,     reporter = reporter, load_helpers = load_helpers, env = env,     stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,     load_package = load_package, parallel = parallel, shuffle = shuffle)
  58: test_dir("testthat", package = package, reporter = reporter,     ..., load_package = "installed")
  59: test_check("readxl")
  An irrecoverable exception occurred. R is aborting now ...

compiled code

File 'readxl/libs/x64/readxl.dll':
  Found non-API call to R: 'R_NamespaceRegistry'

Compiled code should not call non-API entry points in R.

See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.

compiled code

File ‘readxl/libs/readxl.so’:
  Found non-API call to R: ‘R_NamespaceRegistry’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.