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aelab

Data Processing for Aquatic Ecology

v1.1.3 · May 7, 2026 · GPL (>= 3)

Description

Facilitate the analysis of data related to aquatic ecology, specifically the establishment of carbon budget. Currently, the package allows the below analysis. (i) the calculation of greenhouse gas flux based on data obtained from trace gas analyzer using the method described in Lin et al. (2024). (ii) the calculation of Dissolved Oxygen (DO) metabolism based on data obtained from dissolved oxygen data logger using the method described in Staehr et al. (2010). Yong et al. (2024) <doi:10.5194/bg-21-5247-2024>. Staehr et al. (2010) <doi:10.4319/lom.2010.8.0628>.

Downloads

CRAN

332

Last 30 days

13488th

947

Last 90 days

3.4K

Last year

Trend: -2.1% (30d vs prior 30d)

r2u CRAN

2

Last 30 days

38

Last 90 days

274

Last year

Trend: -90% (30d vs prior 30d)

autoCRAN

7

Last 7 days

42

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Packages required but not available: 'FSA', 'rcompanion', 'ggspatial'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

3,909

Files

72

Compiled share

0%

Has compiled src

No

Language breakdown

R 1,737 (44.4%)Tests 548 (14%)Docs 1,295 (33.1%)Vignettes 329 (8.4%)

API

Exported functions

37

Internal functions

2

Recent export changes

v1.1.3+1 sig_labels
v1.1.0+24 aelab_palettes, aov_test, calc_chla_trichromatic +21 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.32

testthat edition

3

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

31.4%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.1.0

System requirements

C++ standard

License

GPL (>= 3)

License flags

SPDX valid, OSI approved

History

Versions

5

First release

2024-07-08

Latest release

2026-05-07

Avg cadence

128 days

Cold removal rate

100%

Dep drift

10

LOC over versions

v0.4.0: 847 LOCv1.0.1: 1,799 LOCv1.1.0: 3,500 LOCv1.1.1: 3,624 LOCv1.1.3: 3,909 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies tibble lubridate dplyr openxlsx readxl ggplot2 readr tidyr stringr purrr rlang multcompView FSA rcompanion rnaturalearth +2 more dependencies aelab

Version History

6 tracked
updated 1.1.3 ← 1.1.1 diff May 7, 2026
new 1.1.1 Mar 10, 2026
updated 1.1.1 ← 1.1.0 diff Feb 25, 2026
updated 1.1.0 ← 1.0.1 diff Feb 22, 2026
updated 1.0.1 ← 0.4.0 diff Jan 8, 2025
new 0.4.0 Jul 7, 2024