Description
A toolkit for making antigenic maps from immunological assay data, in order to quantify and visualize antigenic differences between different pathogen strains as described in Smith et al. (2004) <doi:10.1126/science.1097211> and used in the World Health Organization influenza vaccine strain selection process. Additional functions allow for the diagnostic evaluation of antigenic maps and an interactive viewer is provided to explore antigenic relationships amongst several strains and incorporate the visualization of associated genetic information.
Downloads
360
Last 30 days
10624th
1.2K
Last 90 days
7K
Last year
Trend: -21.1% (30d vs prior 30d)
CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (3 non-OK)
installed package size
installed size is 25.1Mb
sub-directories of 1Mb or more:
doc 5.3Mb
htmlwidgets 1.8Mb
libs 16.0Mb
installed package size
installed size is 25.4Mb
sub-directories of 1Mb or more:
doc 5.3Mb
htmlwidgets 1.8Mb
libs 16.2Mb
installed package size
installed size is 11.3Mb
sub-directories of 1Mb or more:
doc 5.3Mb
htmlwidgets 1.8Mb
libs 2.1Mb
Check History
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
installed package size
installed size is 25.1Mb
sub-directories of 1Mb or more:
doc 5.3Mb
htmlwidgets 1.8Mb
libs 16.0Mb
installed package size
installed size is 25.4Mb
sub-directories of 1Mb or more:
doc 5.3Mb
htmlwidgets 1.8Mb
libs 16.2Mb
installed package size
installed size is 11.3Mb
sub-directories of 1Mb or more:
doc 5.3Mb
htmlwidgets 1.8Mb
libs 2.1Mb