PlateVision

Automated qPCR Analysis and Visual Quality Control

v0.1.0 · Dec 22, 2025 · GPL-3

Description

Directly pipes raw quantitative PCR (qPCR) machine outputs into downstream analyses using the comparative Ct (Delta-Delta Ct) method described by Livak and Schmittgen (2001) <doi:10.1006/meth.2001.1262>. Streamlines the workflow from 'Excel' export to publication-ready plots. Integrates unique visual quality control by reconstructing 96-well plate heatmaps, allowing users to instantly detect pipetting errors, edge effects, and outliers. Key features include automated error propagation, laboratory master mix calculations, and generation of bar charts and volcano plots.

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CRAN Check Status

13 OK

Show all 13 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	46.1s
r-devel-linux-x86_64-debian-gcc	OK	33.9s
r-devel-linux-x86_64-fedora-clang	OK	68s
r-devel-linux-x86_64-fedora-gcc	OK	63.5s
r-devel-windows-x86_64	OK	63s
r-oldrel-macos-arm64	OK	13s
r-oldrel-macos-x86_64	OK	100s
r-oldrel-windows-x86_64	OK	74s
r-patched-linux-x86_64	OK	42s
r-release-linux-x86_64	OK
r-release-macos-arm64	OK	14s
r-release-macos-x86_64	OK	45s
r-release-windows-x86_64	OK	63s

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026

ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026

ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Package required but not available: ‘plotly’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Version History

1 tracked

new 0.1.0 Mar 10, 2026

R Observatory began tracking this package on Mar 10, 2026; it first appeared on CRAN Dec 22, 2025. Releases before tracking aren’t shown.