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epitraxr

Manipulate 'EpiTrax' Data and Generate Reports

v0.5.0 · Sep 14, 2025 · MIT + file LICENSE

Description

A fast, flexible tool for generating disease surveillance reports from data exported from 'EpiTrax', a central repository for epidemiological data used by public health officials. It provides functions to manipulate 'EpiTrax' datasets, tailor reports to internal or public use, and export reports in CSV, Excel 'xlsx', or PDF formats.

Downloads

CRAN

420

Last 30 days

9637th

1.4K

Last 90 days

4.6K

Last year

Trend: -12.5% (30d vs prior 30d)

r2u CRAN

0

Last 30 days

18

Last 90 days

51

Last year

Trend: -100% (30d vs prior 30d)

autoCRAN

3

Last 7 days

14

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

30,635

Files

105

Compiled share

0%

Has compiled src

No

Language breakdown

R 3,153 (10.3%)Tests 3 (0%)Docs 2,419 (7.9%)Vignettes 25,060 (81.8%)

API

Exported functions

57

Internal functions

0

Recent export changes

v0.5.0+57 clear_old_reports, compute_trend, convert_counts_to_rate +54 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

7%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.1.0

System requirements

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

1

First release

2025-09-14

Latest release

2025-09-14

Avg cadence

Cold removal rate

Dep drift

0

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies lubridate writexl yaml epitraxr

Version History

1 tracked
new 0.5.0 Mar 10, 2026

R Observatory began tracking this package on Mar 10, 2026; it first appeared on CRAN Sep 14, 2025. Releases before tracking aren’t shown.