Martin Morgan

8 packages On CRAN since Apr 2006 (20 years) · last active 3 years ago On Bioconductor since Jan 2001 (25 years) · last active 8 months ago 0000-0002-5874-8148

R-Universe CRAN Search

Downloads

1.6M

Last 30 days

Last 90 days

21.3M

Last year

Average trend: +8.8% (30d vs prior 30d)

Top Packages by Downloads

data.table

854.6K

remotes

497.7K

BiocManager

252.5K

dataverse

2.3K

rjsoncons

2.1K

UCSCXenaTools

1.9K

rapiclient

1.1K

aws.ecx

380

Portfolio Check Status

Aggregate CRAN check results across 1 maintained package.

Recent Activity

rjsoncons updated v1.3.3 Jun 3, 2026

Query, Pivot, Patch, and Validate 'JSON' and 'NDJSON'

data.table updated v1.18.4 May 6, 2026

Extension of `data.frame`

BiocManager new v1.30.27 Mar 10, 2026

Access the Bioconductor Project Package Repository

UCSCXenaTools new v1.7.0 Mar 10, 2026

Download and Explore Datasets from UCSC Xena Data Hubs

aws.ecx new v1.0.6 Mar 10, 2026

Communicating with AWS EC2 and ECS using AWS REST APIs

data.table new v1.18.2.1 Mar 10, 2026

Extension of `data.frame`

dataverse new v0.3.16 Mar 10, 2026

Client for Dataverse 4+ Repositories

rapiclient new v0.1.8 Mar 10, 2026

Dynamic OpenAPI/Swagger Client

remotes new v2.5.0 Mar 10, 2026

R Package Installation from Remote Repositories, Including 'GitHub'

rjsoncons new v1.3.2 Mar 10, 2026

Query, Pivot, Patch, and Validate 'JSON' and 'NDJSON'

Maintained Packages

1 package

Package	Title	Downloads	Version
rjsoncons	Query, Pivot, Patch, and Validate 'JSON' and 'NDJSON'	2.1K	1.3.3

Co-authored Packages

3 packages

Package	Title	Downloads	Version
remotes	R Package Installation from Remote Repositories, Including 'GitHub'	497.7K	2.5.0
BiocManager	Access the Bioconductor Project Package Repository	252.5K	1.30.27
aws.ecx	Communicating with AWS EC2 and ECS using AWS REST APIs	380	1.0.6

Contributions

4 packages

Package	Title	Downloads	Version
data.table	Extension of `data.frame`	854.6K	1.18.4
dataverse	Client for Dataverse 4+ Repositories	2.3K	0.3.16
UCSCXenaTools	Download and Explore Datasets from UCSC Xena Data Hubs	1.9K	1.7.0
rapiclient	Dynamic OpenAPI/Swagger Client	1.1K	0.1.8

Bioconductor Packages

72 packages

Package	Title	Category	Version
AlphaMissenseR Bioc	Accessing AlphaMissense Data Resources in R	software	1.8.0
AnVIL Bioc	Bioconductor on the AnVIL compute environment	software	1.24.0
AnVILAz Bioc	R / Bioconductor Support for the AnVIL Azure Platform	software	1.6.0
AnVILBase Bioc	Generic functions for interacting with the AnVIL ecosystem	software	1.6.0
AnVILGCP Bioc	The GCP R Client for the AnVIL	software	1.6.2
AnVILPublish Bioc	Publish Packages and Other Resources to AnVIL Workspaces	software	1.22.0
AnnotationFilter Bioc	Facilities for Filtering Bioconductor Annotation Resources	software	1.36.0
AnnotationHub Bioc	Client to access AnnotationHub resources	software	4.2.2
AnnotationHubData Bioc	Transform public data resources into Bioconductor Data Structures	software	1.42.0
BiocBaseUtils Bioc	Utility and internal functions for Bioconductor packages	software	1.14.2
BiocDeveloper Bioc removed	General utility functions for developing Bioconductor packages		0.99.9
BiocFileCache Bioc	Manage Files Across Sessions	software	3.2.0
BiocGenerics Bioc	S4 generic functions used in Bioconductor	software	0.58.1
BiocIO Bioc	Standard Input and Output for Bioconductor Packages	software	1.22.0
BiocParallel Bioc	Bioconductor facilities for parallel evaluation	software	1.46.0
BiocPkgTools Bioc	Collection of simple tools for learning about Bioconductor Packages	software	1.30.0
BiocSet Bioc	Representing Different Biological Sets	software	1.25.0
BiocStyle Bioc	Standard styles for vignettes and other Bioconductor documents	software	2.40.0
BiocUtils Bioc removed	General utility functions for Bioconductor packages		0.99.4
BiocVersion Bioc	Set the appropriate version of Bioconductor packages	software	3.23.1
CuratedAtlasQueryR Bioc	Queries the Human Cell Atlas	software	1.10.0
DelayedDataFrame Bioc	Delayed operation on DataFrame using standard DataFrame metaphor	software	1.28.0
DirichletMultinomial Bioc	Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data	software	1.54.0
ExperimentHub Bioc	Client to access ExperimentHub resources	software	3.2.0
GCPtools Bioc	Tools for working with gcloud and gsutil	software	1.2.1
GCSConnection Bioc removed	Creating R Connection with Google Cloud Storage		1.8.0
GCSFilesystem Bioc removed	Mounting a Google Cloud bucket to a local directory		1.6.0
GDSArray Bioc	Representing GDS files as array-like objects	software	1.32.0
GSEABase Bioc	Gene set enrichment data structures and methods	software	1.74.0
GenomeInfoDb Bioc	Utilities for manipulating chromosome names, including modifying them to follow a particular naming style	software	1.48.0
GenomicAlignments Bioc	Representation and manipulation of short genomic alignments	software	1.48.0
GenomicDataCommons Bioc	NIH / NCI Genomic Data Commons Access	software	1.36.0
GenomicFiles Bioc	Distributed computing by file or by range	software	1.48.0
GenomicRanges Bioc	Representation and manipulation of genomic intervals	software	1.64.0
HCABrowser Bioc removed	Browse the Human Cell Atlas data portal		1.8.0
HCAExplorer Bioc removed	Browse the Human Cell Atlas data portal		1.6.0
HCAMatrixBrowser Bioc removed	Extract and manage matrix data from the Human Cell Atlas project		1.2.0
HuBMAPR Bioc	Interface to 'HuBMAP'	software	1.6.1
HubPub Bioc	Utilities to create and use Bioconductor Hubs	software	1.20.0
KEGGREST Bioc	Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)	software	1.52.2
MultiAssayExperiment Bioc	Software for the integration of multi-omics experiments in Bioconductor	software	1.38.0
MultipleAlignment Bioc removed	Representation of multiple sequence alignments in Bioconductor		0.99.4
Organism.dplyr Bioc	dplyr-based Access to Bioconductor Annotation Resources	software	1.40.0
OrganismDbi Bioc	Software to enable the smooth interfacing of different database packages	software	1.54.0
RaggedExperiment Bioc	Representation of Sparse Experiments and Assays Across Samples	software	1.36.0
RedisParam Bioc	Provide a 'redis' back-end for BiocParallel	software	1.14.0
Rhtslib Bioc	HTSlib high-throughput sequencing library as an R package	software	3.8.0
Rsamtools Bioc	Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import	software	2.28.0
SQLDataFrame Bioc	Representation of SQL tables in DataFrame metaphor	software	1.26.0
SharedObject Bioc	Sharing R objects across multiple R processes without memory duplication	software	1.25.0
ShortRead Bioc	FASTQ input and manipulation	software	1.70.0
SummarizedExperiment Bioc	A container (S4 class) for matrix-like assays	software	1.42.0
TENxBrainData Bioc	Data from the 10X 1.3 Million Brain Cell Study	experiment	1.32.0
Travel Bioc removed	An utility to create an ALTREP object with a virtual pointer		1.10.0
VCFArray Bioc	Representing on-disk / remote VCF files as array-like objects	software	1.28.0
VariantAnnotation Bioc	Annotation of Genetic Variants	software	1.58.0
VariantExperiment Bioc	A RangedSummarizedExperiment Container for VCF/GDS Data with GDS Backend	software	1.26.0
affxparser Bioc	Affymetrix File Parsing SDK	software	1.84.0
anndataR Bioc	AnnData interoperability in R	software	1.2.0
annotation Bioc	Genomic Annotation Resources	workflows	1.36.0
biocbranchrename Bioc removed	Test branch renaming		0.99.0
cellxgenedp Bioc	Discover and Access Single Cell Data Sets in the CELLxGENE Data Portal	software	1.16.0
cigarillo Bioc	Efficient manipulation of CIGAR strings	software	1.2.0
curatedTCGAData Bioc	Curated Data from The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects	experiment	1.34.0
gpuMagic Bioc removed	An openCL compiler with the capacity to compile R functions and run the code on GPU		1.26.0
hca Bioc	Exploring the Human Cell Atlas Data Coordinating Platform	software	1.20.0
rhdf5 Bioc	R Interface to HDF5	software	2.56.0
rigvf Bioc	R interface to the IGVF Catalog	software	1.4.0
sequencing Bioc	Introduction to Bioconductor for Sequence Data	workflows	1.36.0
spbtest3 Bioc removed	Test Single Package Builder		0.99.126
spbtest5 Bioc removed	Test Single Package Builder		0.99.4
variants Bioc	Annotating Genomic Variants	workflows	1.36.0

Roles

Maintains 1

Co-authors 3

Contributes 4

Impact

packages depend on their work

Frequent Collaborators

Marcel Ramos 3 pkgs

Hadley Wickham 2 pkgs

Jim Hester 2 pkgs

Alexandru Mahmoud 1 pkg

Aljaž Sluga 1 pkg

Andrey Riabushenko 1 pkg

Angel Feliz 1 pkg

Anirban Chetia 1 pkg

+4 more

Career

On CRAN since Apr 2006 (20 years) · last active 3 years ago

On Bioconductor since Jan 2001 (25 years) · last active 8 months ago

Links

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