KEGGREST
Bioc currentClient-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)
Release Lineage
Entered 2.12 · Apr 4, 2013
Current · Requires R 4.6
Description
A package that provides a client interface to the Kyoto Encyclopedia of Genes and Genomes (KEGG) REST API. Only for academic use by academic users belonging to academic institutions (see <https://www.kegg.jp/kegg/rest/>). Note that KEGGREST is based on KEGGSOAP by J. Zhang, R. Gentleman, and Marc Carlson, and KEGG (python package) by Aurelien Mazurie.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
34 9 exported
Complexity
2.4 avg / 15 max
Call network
34 nodes / 31 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
1,284
Files
20
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
9
Internal functions
25
Testing
Has tests
Yes
Test-to-code ratio
0.00
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.5.0
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
27
First release
2013-04-24
Latest release
2026-06-16
Avg cadence
178 days
Cold removal rate
100%
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 9
- Examples that run
- 100%9 run in a plain check
- Exported functions with examples
- 100%
- Documented parameters
- 90%
- Return-value docs
- 100%
- Help pages citing references
- 100%
Repository practices
Checks run against github.com/bioconductor/keggrest on 2026-10-21.
No development-tooling practices detected in the upstream repository.
Topics
Depended on by (38)
Show 55 packagesHide 55 packages
Bioconductor (37)
CRAN (1)
People
- Bioconductor Package Maintainer author maintainer
- Martin Morgan contributor
- Kozo Nishida contributor
- Marcel Ramos contributor
- Kristina Riemer contributor
- Lori Shepherd contributor
- Dan Tenenbaum author
- Jeremy Volkening contributor
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("KEGGREST")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.