HCAMatrixBrowser
Bioc removedExtract and manage matrix data from the Human Cell Atlas project
Release Lineage
Entered 3.12 · Oct 28, 2020
Removed after 3.13 · May 20, 2021
Description
The HCAMatrixBrowser queries the HCA matrix endpoint to download expression data and returns a standard Bioconductor object. It uses the LoomExperiment package to serve matrix data that is downloaded as HDF5 loom format.
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Topics
Depended on by (1)
Bioconductor (1)
People
- Marcel Ramos author maintainer
- Martin Morgan author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("HCAMatrixBrowser")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
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For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.