AnnotationFilter
Bioc currentFacilities for Filtering Bioconductor Annotation Resources
Release Lineage
Entered 3.5 · Apr 25, 2017
Current · Requires R 4.6
Description
This package provides class and other infrastructure to implement filters for manipulating Bioconductor annotation resources. The filters will be used by ensembldb, Organism.dplyr, and other packages.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
27 4 exported
Complexity
2.8 avg / 16 max
Call network
27 nodes / 6 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
2,276
Files
17
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
30
Internal functions
18
Recent export changes
Testing
Has tests
Yes
Test-to-code ratio
0.28
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.4.0
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
19
First release
2017-04-24
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 3
- Examples that run
- 100%2 run in a plain check
- Exported functions with examples
- 67%
- Documented parameters
- 95%
- Return-value docs
- 100%
- Help pages citing references
- 0%
Repository practices
Checks run against github.com/bioconductor/annotationfilter on 2026-10-21.
No development-tooling practices detected in the upstream repository.
Topics
Depended on by (21)
Show all 27 packagesHide all 27 packages
Bioconductor (19)
CRAN (2)
Suggested by (6)
People
- Bioconductor Package Maintainer maintainer
- Joachim Bargsten contributor
- Martin Morgan author
- Johannes Rainer author
- Daniel Van Twisk contributor
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("AnnotationFilter")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.