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GDSArray

Bioc current

Representing GDS files as array-like objects

v1.32.0 · software · GPL-3
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Release Lineage

Entered 3.7 · May 1, 2018

Current · Requires R 4.6

1.0 In 17 of 49 releases 3.23

Description

GDS files are widely used to represent genotyping or sequence data. The GDSArray package implements the `GDSArray` class to represent nodes in GDS files in a matrix-like representation that allows easy manipulation (e.g., subsetting, mathematical transformation) in _R_. The data remains on disk until needed, so that very large files can be processed.

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Topics

Software › Infrastructure
Software › Infrastructure › DataRepresentation
Software › Technology › Sequencing
Software › Technology › Microarray › GenotypingArray

Depended on by (3)

Bioconductor (3)

CNVRanger DelayedDataFrame VariantExperiment

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