AnVIL
Bioc currentBioconductor on the AnVIL compute environment
Release Lineage
Entered 3.11 · Apr 28, 2020
Current · Requires R 4.6
Description
The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The AnVIL package provides programatic access to the Dockstore, Leonardo, Rawls, TDR, and Terra RESTful programming interfaces. For platform-specific user-level functionality, see either the AnVILGCP or AnVILAz package.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
51 14 exported
Complexity
1.9 avg / 9 max
Call network
51 nodes / 37 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,437
Files
55
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
22
Internal functions
14
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.14
testthat edition
–
CI present
Yes
CI type
["github-actions"]
PR gated
No
Docs
Roxygen coverage
77.3%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.6.0
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
13
First release
2020-05-03
Latest release
2026-04-28
Avg cadence
161 days
Cold removal rate
100%
Dep drift
18
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 0%
Topics
Depended on by (10)
People
- Marcel Ramos author maintainer
- Vincent Carey contributor
- Yubo Cheng author
- Sweta Gopaulakrishnan contributor
- Kayla Interdonato author
- Martin Morgan author
- Valerie Obenchain contributor
- Sehyun Oh contributor
- BJ Stubbs contributor
- Nitesh Turaga author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("AnVIL")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.