GenomicDataCommons
Bioc currentNIH / NCI Genomic Data Commons Access
Release Lineage
Entered 3.5 · Apr 25, 2017
Current · Requires R 4.6
Description
Programmatically access the NIH / NCI Genomic Data Commons RESTful service.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
111 50 exported
Complexity
1.6 avg / 8 max
Call network
111 nodes / 104 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
5,079
Files
83
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
50
Internal functions
58
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.10
testthat edition
–
CI present
Yes
CI type
["github-actions"]
PR gated
Yes
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.1.0
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
19
First release
2017-09-14
Latest release
2026-04-28
Avg cadence
180 days
Cold removal rate
100%
Dep drift
12
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 94%
- Documented parameters
- 98%
- Return-value docs
- 100%
- References docs
- 3%
Topics
Depended on by (5)
Bioconductor (5)
People
- Sean Davis author maintainer
- Martin Morgan author
- Marcel Ramos contributor
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("GenomicDataCommons")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.