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DelayedMatrixStats

Bioc current

Functions that Apply to Rows and Columns of 'DelayedMatrix' Objects

v1.34.0 · software · MIT + file LICENSE

Release Lineage

Entered 3.6 · Oct 31, 2017

Current · Requires R 4.6

1.0 In 18 of 49 releases 3.23

Description

A port of the 'matrixStats' API for use with DelayedMatrix objects from the 'DelayedArray' package. High-performing functions operating on rows and columns of DelayedMatrix objects, e.g. col / rowMedians(), col / rowRanks(), and col / rowSds(). Functions optimized per data type and for subsetted calculations such that both memory usage and processing time is minimized.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

85 0 exported

Complexity

2.9 avg / 9 max

Call network

85 nodes / 128 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

8,465

Files

131

Compiled share

0%

Has compiled src

No

Language breakdown

R 4,899 (57.9%)Tests 562 (6.6%)Docs 2,663 (31.5%)Vignettes 341 (4%)

API

Exported functions

6

Internal functions

81

Recent export changes

v3.9−2 colsum, rowsum
v3.8+2 colsum, rowsum

Testing & CI

Has tests

Yes

Test-to-code ratio

0.11

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

87.5%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

18

First release

2018-02-13

Latest release

2026-04-28

Avg cadence

189 days

Cold removal rate

100%

Dep drift

8

LOC over versions

v3.6: 13,382 LOCv3.7: 14,247 LOCv3.8: 11,205 LOCv3.9: 10,710 LOCv3.10: 10,711 LOCv3.11: 11,465 LOCv3.12: 8,350 LOCv3.13: 8,744 LOCv3.14: 8,744 LOCv3.15: 8,750 LOCv3.16: 8,750 LOCv3.17: 8,649 LOCv3.18: 8,688 LOCv3.19: 8,499 LOCv3.20: 8,465 LOCv3.21: 8,465 LOCv3.22: 8,465 LOCv3.23: 8,465 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMEYes · 1,861 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
not tracked
Return-value docs
0%
References docs
0%

Topics

Depended on by (59)

CRAN (2)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("DelayedMatrixStats")
Hickey, P., Lun, A., & Pagès, H. (2026). DelayedMatrixStats: Functions that Apply to Rows and Columns of 'DelayedMatrix' Objects (Version 1.34.0) [Computer software]. https://bioconductor.org/packages/DelayedMatrixStats

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for DelayedMatrixStats version 1.34.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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