ClustAssess
Tools for Assessing Clustering
Description
A set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) <doi:10.1038/srep06207>), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) <doi:10.1038/s41598-019-44892-y>). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.
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CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
package dependencies
Packages required but not available: 'gprofiler2', 'plotly', 'Seurat' Packages suggested but not available for checking: 'DelayedMatrixStats', 'monocle3', 'SharedObject' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Package suggested but not available for checking: 'monocle3'
ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/ClustAssess.Rcheck/00install.out' for details.
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Package suggested but not available for checking: 'monocle3'
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 10, 2026
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Package suggested but not available for checking: 'monocle3'
ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 9, 2026
package dependencies
Packages required but not available: 'Seurat', 'uwot' Package suggested but not available for checking: ‘monocle3’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Package suggested but not available for checking: 'monocle3'
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Packages suggested but not available for checking: 'monocle3', 'SharedObject'
package dependencies
Package suggested but not available for checking: 'monocle3'