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preprocessCore

Bioc current

A collection of pre-processing functions

v1.74.0 · software · LGPL (>= 2)

Release Lineage

Entered 2.1 · Oct 8, 2007

Current · Requires R 4.6

1.0 In 38 of 49 releases 3.23

Description

A library of core preprocessing routines.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

310 0 exported

Complexity

4.7 avg / 12 max

Call network

310 nodes / 411 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

19,399

Files

106

Compiled share

89.9%

Has compiled src

Yes

Language breakdown

R 894 (4.6%)C/C++/src 17,439 (89.9%)Tests 273 (1.4%)Docs 793 (4.1%)

API

Exported functions

39

Internal functions

0

Testing & CI

Has tests

Yes

Test-to-code ratio

0.31

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

LGPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

38

First release

2007-10-03

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

2

LOC over versions

v2.1: 9,503 LOCv2.2: 16,366 LOCv2.3: 16,434 LOCv2.4: 17,285 LOCv2.5: 17,456 LOCv2.6: 17,456 LOCv2.7: 17,451 LOCv2.8: 17,563 LOCv2.9: 17,563 LOCv2.10: 18,535 LOCv2.11: 18,535 LOCv2.12: 18,534 LOCv2.13: 18,534 LOCv2.14: 18,668 LOCv3.0: 19,115 LOCv3.1: 19,115 LOCv3.2: 19,115 LOCv3.3: 19,115 LOCv3.4: 19,115 LOCv3.5: 19,115 LOCv3.6: 19,115 LOCv3.7: 19,115 LOCv3.8: 19,115 LOCv3.9: 19,115 LOCv3.10: 19,115 LOCv3.11: 19,251 LOCv3.12: 19,259 LOCv3.13: 19,259 LOCv3.14: 19,283 LOCv3.15: 19,285 LOCv3.16: 19,285 LOCv3.17: 19,285 LOCv3.18: 19,285 LOCv3.19: 19,285 LOCv3.20: 19,285 LOCv3.21: 19,285 LOCv3.22: 19,399 LOCv3.23: 19,399 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (83)

CRAN (16)

People

Ben Bolstad

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("preprocessCore")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for preprocessCore version 1.74.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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