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mimager

Bioc current

mimager: The Microarray Imager

v1.36.0 · software · MIT + file LICENSE

Release Lineage

Entered 3.5 · Apr 25, 2017

Current · Requires R 4.6

1.0 In 19 of 49 releases 3.23

Description

Easily visualize and inspect microarrays for spatial artifacts.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

17 2 exported

Complexity

2.9 avg / 6 max

Call network

17 nodes / 8 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,592

Files

34

Compiled share

0%

Has compiled src

No

Language breakdown

R 906 (56.9%)Tests 212 (13.3%)Docs 322 (20.2%)Vignettes 152 (9.5%)

API

Exported functions

4

Internal functions

14

Recent export changes

v3.5+4 arank, arle, marray +1 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.23

testthat edition

CI present

Yes

CI type

["travis"]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

19

First release

2017-04-24

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v3.5: 1,592 LOCv3.6: 1,592 LOCv3.7: 1,592 LOCv3.8: 1,592 LOCv3.9: 1,592 LOCv3.10: 1,592 LOCv3.11: 1,592 LOCv3.12: 1,592 LOCv3.13: 1,592 LOCv3.14: 1,592 LOCv3.15: 1,592 LOCv3.16: 1,592 LOCv3.17: 1,592 LOCv3.18: 1,592 LOCv3.19: 1,592 LOCv3.20: 1,592 LOCv3.21: 1,592 LOCv3.22: 1,592 LOCv3.23: 1,592 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMEYes · 53 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
0%

Topics

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("mimager")
Wolen, A. (2026). mimager: mimager: The Microarray Imager (Version 1.36.0) [Computer software]. https://bioconductor.org/packages/mimager

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for mimager version 1.36.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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