Skip to content

aroma.affymetrix

Analysis of Large Affymetrix Microarray Data Sets

v3.2.3 · Aug 19, 2025 · LGPL (>= 2.1)

Description

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system. The only parameter that limits the number of chips that can be processed is the amount of available disk space. The Aroma Framework has successfully been used in studies to process tens of thousands of arrays. This package has actively been used since 2006.

Downloads

576

Last 30 days

6991st

1.9K

Last 90 days

9.4K

Last year

Trend: -25.3% (30d vs prior 30d)

CRAN Check Status

3 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (5 non-OK)
NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.2Mb
  sub-directories of 1Mb or more:
    R             3.1Mb
    help          1.1Mb
    testScripts   1.1Mb
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘AffymetrixDataTestFiles’
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.2Mb
  sub-directories of 1Mb or more:
    R             3.1Mb
    help          1.2Mb
    testScripts   1.1Mb
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘AffymetrixDataTestFiles’
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  5.3Mb
  sub-directories of 1Mb or more:
    R      2.3Mb
    help   1.2Mb

Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘AffymetrixDataTestFiles’
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘AffymetrixDataTestFiles’
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  5.3Mb
  sub-directories of 1Mb or more:
    R      2.3Mb
    help   1.2Mb

Reverse Dependencies (1)

depends

Dependency Network

Dependencies Reverse dependencies R.utils aroma.core R.methodsS3 R.oo R.cache (>= 0.14.0) R.devices R.filesets aroma.apd MASS matrixStats listenv future ACNE aroma.affymetrix

Version History

new 3.2.3 Mar 10, 2026
updated 3.2.3 ← 3.2.2 diff Aug 18, 2025
updated 3.2.2 ← 3.2.1 diff Feb 17, 2024
updated 3.2.1 ← 3.2.0 diff Jul 17, 2022
updated 3.2.0 ← 3.1.1 diff Jun 22, 2019
updated 3.1.1 ← 3.1.0 diff Apr 15, 2018
updated 3.1.0 ← 3.0.0 diff Mar 23, 2017
updated 3.0.0 ← 2.14.0 diff Jan 9, 2016
updated 2.14.0 ← 2.13.2 diff Oct 24, 2015
updated 2.13.2 ← 2.13.0 diff May 26, 2015
updated 2.13.0 ← 2.12.0 diff Jan 19, 2015
updated 2.12.0 ← 2.11.1 diff Mar 9, 2014
updated 2.11.1 ← 2.10.0 diff Oct 17, 2013
updated 2.10.0 ← 2.9.0 diff Aug 5, 2013
updated 2.9.0 ← 2.8.0 diff May 2, 2013
updated 2.8.0 ← 2.7.0 diff Dec 21, 2012
updated 2.7.0 ← 2.6.0 diff Nov 25, 2012
updated 2.6.0 ← 2.5.0 diff Sep 5, 2012
updated 2.5.0 ← 2.4.0 diff Mar 25, 2012
updated 2.4.0 ← 2.3.0 diff Jan 11, 2012