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GOstats

Bioc current

Tools for manipulating GO and microarrays

v2.78.0 · software · Artistic-2.0

Release Lineage

Entered 1.4 · May 17, 2004

Current · Requires R 4.6

1.0 In 45 of 49 releases 3.23

Description

A set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

31 19 exported

Complexity

4.7 avg / 15 max

Call network

31 nodes / 19 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

6,901

Files

46

Compiled share

0%

Has compiled src

No

Language breakdown

R 914 (13.2%)Tests 2 (0%)Docs 1,153 (16.7%)Vignettes 4,832 (70%)

API

Exported functions

19

Internal functions

12

Testing & CI

Has tests

Yes

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

41.7%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

2.10

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

45

First release

2004-08-23

Latest release

2026-04-28

Avg cadence

183 days

Cold removal rate

100%

Dep drift

12

LOC over versions

v1.4: 1,216 LOCv1.5: 1,490 LOCv1.6: 1,502 LOCv1.7: 1,506 LOCv1.8: 1,604 LOCv1.9: 1,874 LOCv2.0: 2,051 LOCv2.1: 2,186 LOCv2.2: 2,164 LOCv2.3: 2,164 LOCv2.4: 2,163 LOCv2.5: 2,178 LOCv2.6: 2,178 LOCv2.7: 2,178 LOCv2.8: 2,178 LOCv2.9: 2,178 LOCv2.10: 2,178 LOCv2.11: 1,863 LOCv2.12: 1,863 LOCv2.13: 1,867 LOCv2.14: 6,738 LOCv3.0: 6,738 LOCv3.1: 6,738 LOCv3.2: 6,737 LOCv3.3: 6,737 LOCv3.4: 6,737 LOCv3.5: 6,737 LOCv3.6: 6,942 LOCv3.7: 6,942 LOCv3.8: 6,942 LOCv3.9: 6,942 LOCv3.10: 6,942 LOCv3.11: 6,942 LOCv3.12: 6,942 LOCv3.13: 6,942 LOCv3.14: 6,940 LOCv3.15: 6,940 LOCv3.16: 6,940 LOCv3.17: 6,932 LOCv3.18: 6,901 LOCv3.19: 6,901 LOCv3.20: 6,901 LOCv3.21: 6,901 LOCv3.22: 6,901 LOCv3.23: 6,901 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
99%
Return-value docs
91%
References docs
24%

Topics

Depended on by (35)

CRAN (2)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("GOstats")
Bioconductor Package Maintainer, Castelo, R., Falcon, S., Gentleman, R., Kumari, S., & Ndubi, D. (2026). GOstats: Tools for manipulating GO and microarrays (Version 2.78.0) [Computer software]. https://bioconductor.org/packages/GOstats

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for GOstats version 2.78.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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