geneplotter
Bioc currentGraphics related functions for Bioconductor
Release Lineage
Entered 1.0 · Jan 5, 2001
Current · Requires R 4.6
Description
Functions for plotting genomic data
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
51 20 exported
Complexity
3.7 avg / 21 max
Call network
51 nodes / 36 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
2,824
Files
42
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
20
Internal functions
31
Testing
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
66.7%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
2.10
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
46
First release
2002-05-02
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
14
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 18
- Examples that run
- 94%17 run in a plain check · 1 hold no code
- Exported functions with examples
- 100%
- Documented parameters
- 92%
- Return-value docs
- 54%
- Help pages citing references
- 0%
Repository practices
Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.
No development-tooling practices detected in the Bioconductor git repository.
Datasets
| Name | Class | Size | Also in |
|---|---|---|---|
| IMCAEntrezLink | – | – | – |
| expressionSet133a | – | – | – |
Topics
Depended on by (13)
Show all 21 packagesHide all 21 packages
Bioconductor (13)
People
- Bioconductor Package Maintainer maintainer
- Robert Gentleman author
-
Rohit Satyam
contributor
Converted geneplotter vignette from Sweave to RMarkdown / HTML.
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("geneplotter")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-20, which the citation names so these numbers can be found later. More on citing and the projects behind them.