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GenomicDistributionsData

Bioc current

Reference data for GenomicDistributions package

v1.20.0 · experiment · BSD_2_clause + file LICENSE

Release Lineage

Entered 3.13 · May 20, 2021

Current · Requires R 4.6

1.0 In 11 of 49 releases 3.23

Description

This package provides ready to use reference data for GenomicDistributions package. Raw data was obtained from ensembldb and processed with helper functions. Data files are available for the following genome assemblies: hg19, hg38, mm9 and mm10.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

9 0 exported

Complexity

1.9 avg / 4 max

Call network

9 nodes / 8 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,507

Files

47

Compiled share

0%

Has compiled src

No

Language breakdown

R 645 (42.8%)Docs 727 (48.2%)Vignettes 135 (9%)

API

Exported functions

0

Internal functions

9

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

Yes

CI type

["travis"]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

10%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.1

System requirements

C++ standard

License

BSD_2_clause + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

11

First release

2021-05-19

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v3.13: 1,507 LOCv3.14: 1,507 LOCv3.15: 1,507 LOCv3.16: 1,507 LOCv3.17: 1,507 LOCv3.18: 1,507 LOCv3.19: 1,507 LOCv3.20: 1,507 LOCv3.21: 1,507 LOCv3.22: 1,507 LOCv3.23: 1,507 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (1)

Bioconductor (1)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("GenomicDistributionsData")
Kupkova, K., Lawson, J., Sheffield, N. C., Smith, J., Stolarczyk, M., & Verdezoto, J. (2026). GenomicDistributionsData: Reference data for GenomicDistributions package (Version 1.20.0) [Computer software]. https://bioconductor.org/packages/GenomicDistributionsData

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for GenomicDistributionsData version 1.20.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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