MethylSeekR
Bioc currentSegmentation of Bis-seq data
Release Lineage
Entered 2.12 · Apr 4, 2013
Current · Requires R 4.6
Description
This is a package for the discovery of regulatory regions from Bis-seq data
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
15 11 exported
Complexity
4.3 avg / 14 max
Call network
15 nodes / 6 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
1,981
Files
38
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
11
Internal functions
0
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
Yes
CI type
["github-actions"]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
92.3%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
GPL (>=2)
License flags
not SPDX, not OSI
History
Versions
27
First release
2013-07-25
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 98%
- Return-value docs
- 100%
- References docs
- 8%
Topics
Depended on by (2)
Bioconductor (2)
People
Lukas Burger