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ReactomePA

Bioc current

Reactome Pathway Analysis

v1.56.0 · software · GPL-2
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Release Lineage

Entered 2.10 · Apr 2, 2012

Current · Requires R 4.6

1.0 In 29 of 49 releases 3.23

Description

This package provides functions for pathway analysis based on REACTOME pathway database. It implements enrichment analysis, gene set enrichment analysis and several functions for visualization. This package is not affiliated with the Reactome team.

Code

Code metrics have not been computed for this package yet.

Topics

Software › WorkflowStep › Pathways
Software › WorkflowStep › Visualization
Software › WorkflowStep › Annotation
Software › WorkflowStep › MultipleComparison
Software › BiologicalQuestion › GeneSetEnrichment
Software › WorkflowStep › Pathways › Reactome

Depended on by (26)

Bioconductor (25)

bioCancer CBNplot ChIPseeker cola epiSeeker famat GeDi gINTomics GRaNIE miRSM miRspongeR mitology Pigengene scGPS scGraphVerse scTensor ExpHunterSuite maEndToEnd CINdex epihet fatTissueTumor HDAnalyzeR LINC miRsponge multiSight

CRAN (1)

XYomics

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