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scGPS

Bioc current

A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation)

v1.26.0 · software · GPL-3
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.10 · Oct 30, 2019

Current · Requires R 4.6

1.0 In 14 of 49 releases 3.23

Description

The package implements two main algorithms to answer two key questions: a SCORE (Stable Clustering at Optimal REsolution) to find subpopulations, followed by scGPS to investigate the relationships between subpopulations.

Code

Code metrics have not been computed for this package yet.

Topics

Software › Technology › SingleCell
Software › StatisticalMethod › Clustering
Software › Infrastructure › DataImport
Software › Technology › Sequencing
Software › BiologicalQuestion › Coverage

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