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GeDi

Bioc current

Defining and visualizing the distances between different genesets

v1.7.1 · software · MIT + file LICENSE
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.19 · May 1, 2024

Current · Requires R 4.6

1.0 In 5 of 49 releases 3.23

Description

The package provides different distances measurements to calculate the difference between genesets. Based on these scores the genesets are clustered and visualized as graph. This is all presented in an interactive Shiny application for easy usage.

Code

Code metrics have not been computed for this package yet.

Topics

Software › Infrastructure › GUI
Software › BiologicalQuestion › GeneSetEnrichment
Software
Software › AssayDomain › Transcription
Software › Technology › Sequencing › RNASeq
Software › WorkflowStep › Visualization
Software › StatisticalMethod › Clustering
Software › WorkflowStep › Pathways
Software › WorkflowStep › ReportWriting
Software › WorkflowStep › Pathways › GO
Software › WorkflowStep › Pathways › KEGG
Software › WorkflowStep › Pathways › Reactome
Software › ShinyApps

People