globaltest
Bioc currentTesting Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing
Release Lineage
Entered 1.4 · May 17, 2004
Current · Requires R 4.6
Description
The global test tests groups of covariates (or features) for association with a response variable. This package implements the test with diagnostic plots and multiple testing utilities, along with several functions to facilitate the use of this test for gene set testing of GO and KEGG terms.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
57 23 exported
Complexity
17.8 avg / 125 max
Call network
57 nodes / 78 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
7,984
Files
28
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
24
Internal functions
34
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
95.8%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
GPL (>= 2)
License flags
SPDX valid, OSI approved
History
Versions
45
First release
2004-08-23
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
7
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 88%
- References docs
- 67%
Topics
Depended on by (9)
People
Jelle Goeman
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("globaltest")Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.