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EGSEA

Bioc current

Ensemble of Gene Set Enrichment Analyses

v1.40.0 · software · GPL-3
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.3 · May 4, 2016

Current · Requires R 4.6

1.0 In 21 of 49 releases 3.23

Description

This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. EGSEA algorithm utilizes the analysis results of twelve prominent GSE algorithms in the literature to calculate collective significance scores for each gene set.

Code

Code metrics have not been computed for this package yet.

Topics

Software › ResearchField › Immunology › ImmunoOncology
Software › BiologicalQuestion › DifferentialExpression
Software › WorkflowStep › Pathways › GO
Software › AssayDomain › GeneExpression
Software › BiologicalQuestion › GeneSetEnrichment
Software › ResearchField › Genetics
Software › Technology › Microarray
Software › WorkflowStep › MultipleComparison
Software › Technology › Microarray › OneChannel
Software › WorkflowStep › Pathways
Software › Technology › Sequencing › RNASeq
Software › Technology › Sequencing
Software
Software › ResearchField › SystemsBiology
Software › Technology › Microarray › TwoChannel
Software › ResearchField › Metabolomics
Software › ResearchField › Proteomics
Software › WorkflowStep › Pathways › KEGG
Software › StatisticalMethod › GraphAndNetwork
Software › BiologicalQuestion › GeneSignaling
Software › BiologicalQuestion › GeneTarget
Software › BiologicalQuestion › NetworkEnrichment
Software › WorkflowStep › Visualization › Network
Software › StatisticalMethod › Classification

Depended on by (3)

Bioconductor (3)

tidybulk EGSEAdata EGSEA123

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