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WayFindR

Computing Graph Structures on WikiPathways

v0.7.0 · Jan 8, 2026 · Artistic-2.0

Description

Converts pathways from 'WikiPathways' GPML format or 'KEGG' KGML format into 'igraph' objects. Includes tools to find all cycles in the resulting graphs and determine which ones involve negative feedback (inhibition).

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CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies XML igraph KEGGREST DescTools Rgraphviz WayFindR

Version History

new 0.7.0 Mar 10, 2026
updated 0.7.0 ← 0.5.0 diff Jan 7, 2026
updated 0.5.0 ← 0.4.1 diff Nov 4, 2025
updated 0.4.1 ← 0.3.1 diff Sep 19, 2025
updated 0.3.1 ← 0.1.2 diff Apr 8, 2025
new 0.1.2 Apr 9, 2024