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msm

Multi-State Markov and Hidden Markov Models in Continuous Time

v1.8.2 · Nov 7, 2024 · GPL (>= 2)
CRAN GitHub Mirror

Description

Functions for fitting continuous-time Markov and hidden Markov multi-state models to longitudinal data. Designed for processes observed at arbitrary times in continuous time (panel data) but some other observation schemes are supported. Both Markov transition rates and the hidden Markov output process can be modelled in terms of covariates, which may be constant or piecewise-constant in time.

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14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (85)

depends

CEoptim PRIMEplus elect hysteresis ltm score

imports

ARCensReg ARDL BSTZINB BayesDecon BayesianTools CensSpatial CopCTS DFIT EMC2 EventPredInCure FLORAL Families ICcalib OneSampleMR PanCanVarSel RMark Rchoice SightabilityModel SimKid TrenchR TropFishR VirtualPop ammiBayes biodosetools bmco bsam ccostr cfda clustMD cosa decisionSupport difNLR drugdevelopR dsp eatRep ei eiPack epiphy extrafrail frailtyEM gems gmnl grmsem hesim hmsr horseshoenlm httk icmstate interactionR interactionRCS kardl optBiomarker oro.pet parfm pexm ppweibull riAFTBART rriskDistributions rtdists scDECO semmcmc simExam spCP sparsereg stochLAB surrosurv tradepolicy varTestnlme womblR wxgenR

suggests

MCMCglmm fic fitteR flexsurv markovchain nhm pder qte surveillance

Dependency Network

Dependencies Reverse dependencies survival mvtnorm expm generics tibble CEoptim PRIMEplus elect hysteresis ltm score ARCensReg ARDL BSTZINB BayesDecon BayesianTools CensSpatial CopCTS DFIT EMC2 +70 more reverse deps msm

Version History

new 1.8.2 Mar 10, 2026
updated 1.8.2 ← 1.8.1 diff Nov 6, 2024
updated 1.8.1 ← 1.8 diff Oct 3, 2024
updated 1.8 ← 1.7.1 diff Sep 7, 2024
updated 1.7.1 ← 1.7 diff Nov 22, 2023
updated 1.7 ← 1.6.9 diff Nov 27, 2022
updated 1.6.9 ← 1.6.8 diff Sep 26, 2021
updated 1.6.8 ← 1.6.7 diff Dec 15, 2019
updated 1.6.7 ← 1.6.6 diff Mar 17, 2019
updated 1.6.6 ← 1.6.5 diff Feb 1, 2018
updated 1.6.5 ← 1.6.4 diff Dec 4, 2017
updated 1.6.4 ← 1.6.1 diff Oct 3, 2016
updated 1.6.1 ← 1.6 diff Mar 8, 2016
updated 1.6 ← 1.5 diff Nov 17, 2015
updated 1.5 ← 1.4 diff Jan 5, 2015
updated 1.4 ← 1.3 diff Jul 7, 2014
updated 1.3 ← 1.2 diff Jan 15, 2014
updated 1.2 ← 1.1.4 diff May 14, 2013
updated 1.1.4 ← 1.1.3 diff Dec 9, 2012
updated 1.1.3 ← 1.1.2 diff Sep 27, 2012