biodosetools
'shiny' Application for Biological Dosimetry
v3.7.2
·
Dec 16, 2025
·
GPL-3
Description
A tool to perform all different statistical tests and calculations needed by Biological dosimetry Laboratories. Detailed documentation is available in <https://biodosetools-team.github.io/documentation/>.
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Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | ERROR |
| r-devel-linux-x86_64-fedora-clang | ERROR |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | ERROR |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | ERROR |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | ERROR |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (5 non-OK)
ERROR
r-devel-linux-x86_64-debian-gcc
tests
Running ‘testthat.R’ [15s/19s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biodosetools)
Loading required package: shiny
Loading required package: golem
>
> test_check("biodosetools")
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
Saving _problems/test-golem-recommended-49.R
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:71:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-golem-recommended.R:43:5'): golem-config works ─────────────────
Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression.
Only directly assigned values can be used in expressions.
Original Error:
* loadNamespace(x): there is no package called 'here'
Backtrace:
▆
1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file)
5. └─config::get(value = value, config = config, file = file, use_parent = use_parent)
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
Error:
! Test failures.
Execution halted
ERROR
r-devel-linux-x86_64-fedora-clang
tests
Running ‘testthat.R’ [35s/50s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biodosetools)
Loading required package: shiny
Loading required package: golem
>
> test_check("biodosetools")
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
Saving _problems/test-golem-recommended-49.R
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:71:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-golem-recommended.R:43:5'): golem-config works ─────────────────
Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression.
Only directly assigned values can be used in expressions.
Original Error:
* loadNamespace(x): there is no package called 'here'
Backtrace:
▆
1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file)
5. └─config::get(value = value, config = config, file = file, use_parent = use_parent)
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
Error:
! Test failures.
Execution halted
ERROR
r-devel-windows-x86_64
tests
Running 'testthat.R' [19s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(biodosetools)
Loading required package: shiny
Loading required package: golem
>
> test_check("biodosetools")
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
Saving _problems/test-golem-recommended-49.R
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:71:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-golem-recommended.R:43:5'): golem-config works ─────────────────
Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression.
Only directly assigned values can be used in expressions.
Original Error:
* loadNamespace(x): there is no package called 'here'
Backtrace:
▆
1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file)
5. └─config::get(value = value, config = config, file = file, use_parent = use_parent)
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
Error:
! Test failures.
Execution halted
ERROR
r-oldrel-windows-x86_64
tests
Running 'testthat.R' [26s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(biodosetools)
Loading required package: shiny
Loading required package: golem
>
> test_check("biodosetools")
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
Saving _problems/test-golem-recommended-49.R
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:71:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-golem-recommended.R:43:5'): golem-config works ─────────────────
Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression.
Only directly assigned values can be used in expressions.
Original Error:
* loadNamespace(x): there is no package called 'here'
Backtrace:
▆
1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file)
5. └─config::get(value = value, config = config, file = file, use_parent = use_parent)
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
Error:
! Test failures.
Execution halted
ERROR
r-release-linux-x86_64
tests
Running ‘testthat.R’ [21s/33s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biodosetools)
Loading required package: shiny
Loading required package: golem
>
> test_check("biodosetools")
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
Saving _problems/test-golem-recommended-49.R
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
number of iterations= 43
! Problem with `glm()` -> constraint ML optimization will be used instead
! Problem with `glm()` -> constraint ML optimization will be used instead
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:71:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-golem-recommended.R:43:5'): golem-config works ─────────────────
Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression.
Only directly assigned values can be used in expressions.
Original Error:
* loadNamespace(x): there is no package called 'here'
Backtrace:
▆
1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file)
5. └─config::get(value = value, config = config, file = file, use_parent = use_parent)
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
Error:
! Test failures.
Execution halted
Check History
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 27, 2026
ERROR
r-devel-linux-x86_64-fedora-clang
tests
Running ‘testthat.R’ [35s/50s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biodosetools)
Loading required package: shiny
Loading required package: golem
>
> test_check("biodosetools")
...[truncated]...
::get_golem_config("app_prod", config = "dev", file = config_file)
5. └─config::get(value = value, config = config, file = file, use_parent = use_parent)
[ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
Error:
! Test failures.
Execution halted
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR
r-devel-linux-x86_64-debian-gcc
package dependencies
Package required but not available: ‘mixtools’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.