R Observatory: Metrics for icmstate version 0.2.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

icmstate

0.2.0

Interval Censored Multi-State Models

0packages depend

2Kdownloads / year

45.9%test coverage

13/13checks pass

Overview

About

Maintained by Daniel GomonFirst published 2024-10-283 releasesCRAN page ↗

Allows for the non-parametric estimation of transition intensities in interval-censored multi-state models using the approach of Gomon and Putter (2024) doi:10.48550/arXiv.2409.07176 or Gu et al. (2023) doi:10.1093/biomet/asad073.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("icmstate", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-icmstate

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-icmstate

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-icmstate

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 25.7 min · r-devel-windows-x86_64

Code health

Yes

Tests · ratio 0.17

45.9%

Coverage · measured lines

100%

Documentation · exports

10

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-05-20
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-05-19
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 2 earlier snapshots

ERROR2026-03-30
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 229 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 95%
Documented parameters: 100%
Return-value docs: 96%
References docs: 21%

Downloads

2K

CRAN downloads in the past year

Rank #20,238 · ~6/day · ~170/mo

Releases R versions

Daily download trend is not available in this view yet.

11930 days

54590 days

2K1 year

Compare downloads with other packages →

Also on399 r2u17 autocran

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (10)

Rcpp mstate prodlim igraph checkmate ggplot2 deSolve msmsurvivalJOPS

LinkingTo (1)

Rcpp

Suggests (7)

testthat icenReg profvis knitr rmarkdown bookdown latex2exp

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Daniel Gomon

Author, Maintainer

Authors (2)

Daniel Gomon

Author, Maintainer

Hein Putter

Author

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.2.0Latest
2025-07-04 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
0.1.1
2024-11-09 · diff ↗
0.1.0
2024-10-28
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2024-10-28
Total releases: 3 / 2 yrs
License: GPL (>= 2) OSI
Download size: 834 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("icmstate")

Format

Gomon, D., & Putter, H. (2025). icmstate: Interval Censored Multi-State Models (Version 0.2.0) [Computer software]. https://doi.org/10.32614/CRAN.package.icmstate

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for icmstate version 0.2.0 [Data set]. HJJB, LLC. Data release v2026-08-16. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-16, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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