R Observatory: Metrics for CDMConnector version 2.6.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

CDMConnector

2.6.0

Connect to an OMOP Common Data Model

21packages depend

58Kdownloads / year

42.5%test coverage

13/13checks pass

Overview

About

Maintained by Ger InbergFirst published 2022-09-2933 releasesCRAN page ↗GitHub ↗

Provides tools for working with observational health data in the Observational Medical Outcomes Partnership (OMOP) Common Data Model format with a pipe friendly syntax. Common data model database table references are stored in a single compound object along with metadata.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("CDMConnector", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("darwin-eu/CDMConnector")

Development version from darwin-eu/CDMConnector. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-cdmconnector

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-CDMConnector

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-CDMConnector

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 11.4 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 1.16

42.5%

Coverage · measured lines

98%

Documentation · exports

20

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 3 earlier snapshots

NOTE2026-04-06
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-04
10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 630 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 0%
Documented parameters: 99%
Return-value docs: 82%
References docs: 2%

Downloads

58K

CRAN downloads in the past year

Rank #2,871 · ~159/day · ~4.8K/mo

Releases R versions

Daily download trend is not available in this view yet.

1.4K30 days

5.1K90 days

58K1 year

Compare downloads with other packages →

Also on745 r2u18 autocran

Repository

GitHub ↗ darwin-eu/cdmconnector

17Stars

17Forks

8Open issues

1Open PRs

25Releases

1,067Commits

13Contributors

License Apache-2.0 · 1,067 commits · Last activity 2026-06-23 · +6.3% stars, 30d

Stars over time

2024-06-21 · 112026-07-23 · 17

Repository practices

Upstream repositoryBeta

7 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/darwin-eu/cdmconnector on 2026-08-16.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

Show all practices

Coverage (1)

Codecov

Governance and community (1)

Issue templates

How this is detected·Detection ruleset v1 (2026-07-18)

Development tooling

AI-assisted toolingBeta

Uses AI-assisted development tooling (declared in repo)

Earliest detected marker: claude on 2026-02-26

claude

Most recent: claude on 2026-02-26

Evidence

claude: on or before 2026-02-26 · evidence B, D

How this is detected·Detection ruleset v2 (updated 2026-07-29)

Dependencies

Declared dependencies

41 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (20)

httr2 dplyr dbplyr DBI checkmate cli purrr rlang tidyselect gluemethodswithr lifecycle stringr stringi generics tidyr jsonlite readr omopgenerics

LinkingTo (0)

none

Suggests (22)

SqlRender CirceR rJava covr knitr rmarkdown duckdb RSQLite RPostgres DatabaseConnector odbc ggplot2 bigrquery lubridate clock tibble testthat pool snakecase digest rstudioapi uuid

Enhances (0)

none

Dependency license breakdown →

Code & Tests

People & History

People (6)

Maintainer (1)

Ger Inberg

Author, Maintainer · added in 2.6.0

Authors (6)

Ger Inberg

Author, Maintainer · added in 2.6.0

Adam Black

Author

Edward Burn

Author · added in 0.5.0

Marti Catala Sabate

Author · added in 0.5.0

Artem Gorbachev

Author · added in 0.5.0

Ioanna Nika

Author · added in 2.1.0

Package Timeline

33 releases. Pick two to compare their code metrics. R releases are shown for context.

2.6.0Latest
2026-06-16 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
2.5.1
2026-04-03 · diff ↗
2.5.0
2026-03-08 · diff ↗
2.4.0
2026-02-16 · diff ↗
2.3.0
2026-01-10 · diff ↗
2.2.0
2025-09-16 · diff ↗
2.1.1
2025-07-10 · diff ↗
2.1.0
2025-06-25 · diff ↗
R
R 4.5.0 released · 2025-04-11
2.0.0
2025-02-22 · diff ↗
1.7.0
2024-12-19 · diff ↗
1.6.1
2024-11-29 · diff ↗
1.6.0
2024-11-13 · diff ↗
1.5.0
2024-07-16 · diff ↗
1.4.0
2024-05-03 · diff ↗

Show 26 earlier events

1.3.2
2024-05-01 · diff ↗
R
R 4.4.0 released · 2024-04-24
1.3.1
2024-04-02 · diff ↗
1.3.0
2024-02-05 · diff ↗
1.2.1
2024-01-18 · diff ↗
1.2.0
2023-10-31 · diff ↗
1.1.4
2023-10-20 · diff ↗
1.1.3
2023-10-14 · diff ↗
1.1.2
2023-08-23 · diff ↗
1.1.1
2023-08-22 · diff ↗
1.1.0
2023-08-17 · diff ↗
1.0.0
2023-06-12 · diff ↗
0.6.0
2023-05-05 · diff ↗
R
R 4.3.0 released · 2023-04-21
0.5.1
2023-03-23 · diff ↗
0.5.0
2023-03-09 · diff ↗
0.4.1
2023-01-24 · diff ↗
unarchivedReturned to CRAN
2023-01-24
0.4.0
2023-01-22 · diff ↗
archivedRemoved from CRAN
2023-01-22
policy violation Checking creates and leaves behind '~/EunomiaData'
0.3.1
2022-12-01 · diff ↗
unarchivedReturned to CRAN
2022-12-01
archivedRemoved from CRAN
2022-11-30
policy violation Creates '~/eunomia_cache'
0.3.0
2022-11-29 · diff ↗
0.1.0
2022-09-29
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-09-29
Total releases: 33 / 4 yrs
License: Apache License (>= 2)
Minimum R: ≥ 4.1.0
Download size: 3.9 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("CDMConnector")

Format

Inberg, G., Black, A., Burn, E., Catala Sabate, M., Gorbachev, A., & Nika, I. (2026). CDMConnector: Connect to an OMOP Common Data Model (Version 2.6.0) [Computer software]. https://doi.org/10.32614/CRAN.package.CDMConnector

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for CDMConnector version 2.6.0 [Data set]. HJJB, LLC. Data release v2026-08-16. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-16, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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