R Observatory: Metrics for OmopOnSpark version 0.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

OmopOnSpark

0.1.0Package record

Using a Common Data Model on 'Spark'

0packages depend

2.2Kdownloads / year

2.3%test coverage

13/13flavors OK

Overview

About

Maintained by Edward BurnCRAN page ↗Website ↗

Use health data in the Observational Medical Outcomes Partnership Common Data Model format in 'Spark'. Functionality includes creating all required tables and fields and creation of a single reference to the data. Native 'Spark' functionality is supported.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("OmopOnSpark", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-omoponspark

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-OmopOnSpark

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-OmopOnSpark

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

Additional issues

donttest

CRAN check page ↗

Slowest check: 2.1 min · r-oldrel-macos-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.0

READMEYes · 399 wordsVignettesYes · 3 · dynamicNEWSNoCitation fileNoWebsiteYes · pkgdown

Help pages: 8 (2 internal)includes a package overview page
Examples that run: 0%1 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 25%
Documented parameters: 100%
Return-value docs: 75%
Help pages citing references: 0%

Vignettes (3)

How these are measured

Downloads

2.2K

CRAN downloads in the past year

Rank #22,195 · ~6/day · ~185/mo

Releases R versions

Daily download trend is not available in this view yet.

25130 days

60190 days

2.2K1 year

Compare downloads with other packages →

Also on62 r2u3 autocran

How downloads are counted

Repository

ohdsi/omoponspark ↗Organization: OHDSI

0Stars

0Forks

14Open issues

0Open PRs

0Releases

License file reads as Apache-2.0 · Last activity 2025-10-13

Responsiveness

How these are sampled

PRs merged (all time): 97%
Median days to close, 50 most recently updated closed issues: not measured
Median days to close, 50 most recently updated closed PRs: not measured

How these are measured

PracticesBeta

8 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/ohdsi/omoponspark on 2026-10-22.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux

Docs source (4)

README.Rmdpkgdown

GitHub Pages site last deployed 2025-10-13 · The repository has a site deploy workflow

pkgdown site last built 2025-10-13, before release 0.1.0 (2025-10-22)

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

20 external dependencies (excludes base and recommended)

Installing OmopOnSpark adds 25 packages (12 with compiled code, 20 MB of source tarballs). Heaviest: stringi 11 MB, vctrs 1.0 MB, dplyr 902 KB.

Depends (1)

R >= 4.1.0

Imports (10)

clidatasetsDBI dbplyr dplyr glue omopgenerics (>= 1.3.1)purrr rlang stringr

LinkingTo (0)

none

Suggests (11)

testthat omock knitr rmarkdown CDMConnector OmopSketch odbc R6 crayon sparklyr DatabaseConnector

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (2)

Edward Burn

Author, Maintainer since 0.1.0 (2025)

Martí Català

Author

Releases (1)

R
R 4.6.0 released · 2026-04-24
0.1.0Latest
record
2025-10-22 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-10-22
Total releases: 1 / 1 yrs
License: Apache License (>= 2)
Minimum R: ≥ 4.1.0
Download size: 883 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("OmopOnSpark")

Format

Burn, E., & Català, M. (2025). OmopOnSpark: Using a Common Data Model on 'Spark' (Version 0.1.0) [Computer software]. https://doi.org/10.32614/CRAN.package.OmopOnSpark

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for OmopOnSpark version 0.1.0 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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