November 2019 in CRAN

Part of Q4 2019 and 2019.

Final

108

New packages

672

Updated

Archived

120.7M

Downloads

New packages (60+)

presmTP Methods for Transition Probabilities	2019-11-01
cops Cluster Optimized Proximity Scaling	2019-11-01
diffEnrich Given a List of Gene Symbols, Performs Differential Enrichment Analysis	2019-11-01
fplot Automatic Distribution Graphs Using Formulas	2019-11-01
pedprobr Probability Computations on Pedigrees	2019-11-01
porridge Ridge-Type Penalized Estimation of a Potpourri of Models	2019-11-01
ribd Pedigree-based Relatedness Coefficients	2019-11-01
cvmdisc Cramer von Mises Tests for Discrete or Grouped Distributions	2019-11-04
ccss Cluster Circular Systematic Sampling	2019-11-04
GSelection Genomic Selection	2019-11-04
DiffXTables Pattern Analysis Across Contingency Tables	2019-11-04
ImpactEffectsize Calculation and Visualization of the Impact Effect Size Measure	2019-11-04
NGBVS Bayesian Variable Selection for SNP Data using Normal-Gamma	2019-11-04
RobGARCHBoot Robust Bootstrap Forecast Densities for GARCH Models	2019-11-04
extraoperators Extra Binary Relational and Logical Operators	2019-11-04
funprog Functional Programming	2019-11-04
googlesheets4 Access Google Sheets using the Sheets API V4	2019-11-04
predhy Genomic Prediction of Hybrid Performance	2019-11-04
semEff Automatic Calculation of Effects for Piecewise Structural Equation Models	2019-11-04
tensorregress Supervised Tensor Decomposition with Side Information	2019-11-04
tlrmvnmvt Low-Rank Methods for MVN and MVT Probabilities	2019-11-04
wrMisc Analyze Experimental High-Throughput (Omics) Data	2019-11-04
presentes Registry of Victims of State Terrorism in Argentina	2019-11-05
bcdata Search and Retrieve Data from the BC Data Catalogue	2019-11-05
cleaner Fast and Easy Data Cleaning	2019-11-05
designr Balanced Factorial Designs	2019-11-05
dipsaus A Dipping Sauce for Data Analysis and Visualizations	2019-11-05
envoutliers Methods for Identification of Outliers in Environmental Data	2019-11-05
gravitas Explore Probability Distributions for Bivariate Temporal Granularities	2019-11-05
hereR 'sf'-Based Interface to the 'HERE' REST APIs	2019-11-05
hilbertSimilarity Hilbert Similarity Index for High Dimensional Data	2019-11-05
passt Probability Associator Time (PASS-T)	2019-11-05
qtl2pleio Testing Pleiotropy in Multiparental Populations	2019-11-05
iZID Identify Zero-Inflated Distributions	2019-11-06
BifactorIndicesCalculator Bifactor Indices Calculator	2019-11-06
BinSegBstrap Piecewise Smooth Regression by Bootstrapped Binary Segmentation	2019-11-06
CMapViz Representation Tool For Output Of Connectivity Map (CMap) Analysis	2019-11-06
RPESE Estimates of Standard Errors for Risk and Performance Measures	2019-11-06
RVerbalExpressions Create Regular Expressions Easily	2019-11-06
Rtrack Spatial Navigation Strategy Analysis	2019-11-06
assignR Infer Geographic Origin from Isotopic Data	2019-11-06
hdd Easy Manipulation of Out of Memory Data Sets	2019-11-06
mixl Simulated Maximum Likelihood Estimation of Mixed Logit Models for Large Datasets	2019-11-06
ozmaps Australia Maps	2019-11-06
pdqr Work with Custom Distribution Functions	2019-11-06
MKdescr Descriptive Statistics	2019-11-07
calculus High Dimensional Numerical and Symbolic Calculus	2019-11-07
eudract Creates Safety Results Summary in XML to Upload to EudraCT, or ClinicalTrials.gov	2019-11-07
sur Companion to "Statistics Using R: An Integrative Approach"	2019-11-07
graphicalExtremes Statistical Methodology for Graphical Extreme Value Models	2019-11-08
eoR Data Management Package (Exposure and Occurrence Data in R)	2019-11-10
dupree Identify Duplicated R Code in a Project	2019-11-10
AzureCognitive Interface to Azure Cognitive Services	2019-11-12
Jaya Gradient-Free Optimization Algorithm for Single and Multi-Objective Problems	2019-11-12
RAINBOWR Genome-Wide Association Study with SNP-Set Methods	2019-11-12
dietr Diet Estimated Trophic Levels	2019-11-13
docknitr Use Docker Images to Process Rmarkdown Blocks	2019-11-13
easyr Helpful Functions from Oliver Wyman Actuarial Consulting	2019-11-13
mrf2d Markov Random Field Models for Image Analysis	2019-11-14
vhcub Virus-Host Codon Usage Co-Adaptation Analysis	2019-11-15

Archived / removed

Why

9 check problems were not corrected in time
4 maintainer's request
2 misrepresentation of authorship. No credit for included LINPACK routines
2 request of maintainer. After missing archival deadline
1 check problems were not corrected despite reminders
1 check problems were not corrected in time. Use of uninitialized memory detected by valgrind
1 installation errors were not corrected in time
1 it claims to depend on archived package 'WHO'. But does not make use of it

RMRAINGEN maintainer's request	2019-11-29
BootValidation check problems were not corrected in time	2019-11-25
CEAmarkov it claims to depend on archived package 'WHO'. But does not make use of it	2019-11-25
HiCblock check problems were not corrected in time	2019-11-25
HiCglmi check problems were not corrected in time	2019-11-25
MMS request of maintainer. After missing archival deadline	2019-11-25
WHO policy violation. Repeated failure of Internet access and notification ignored	2019-11-25
exprso check problems were not corrected in time	2019-11-25
mht request of maintainer. After missing archival deadline	2019-11-25
rarhsmm check problems were not corrected in time	2019-11-25
regsel check problems were not corrected in time	2019-11-25
simGWAS installation errors were not corrected in time	2019-11-25
edesign misrepresentation of authorship. No credit for included LINPACK routines	2019-11-21
kexpmv misrepresentation of authorship. No credit for included LINPACK routines	2019-11-21
railtrails maintainer's request	2019-11-21
relaxnet maintainer's request	2019-11-18
widenet maintainer's request	2019-11-18
ubci check problems were not corrected in time	2019-11-16
dpmixsim the request of the maintainer. Had C++11 deprecation warnings	2019-11-11
CAM policy violation. Maintainer's email address says it is no longer read	2019-11-10
P2C2M obsolete Python requirement was not corrected as requested	2019-11-10
sophisthse check problems were not corrected in time	2019-11-08
miniparquet check problems were not corrected in time. Use of uninitialized memory detected by valgrind	2019-11-07
blockseg check problems were not corrected despite reminders	2019-11-06
GLSE check problems were not corrected in time	2019-11-02

Downloads

120.7M

Total downloads

-3.5%

vs prior period

Notable

Major version jumps

DAIME 1.1→2.0 Thermimage 3.2.1→4.0.0 listviewer 2.1.0→3.0.0 AzureStor 2.1.1→3.0.0 SubTite 2.0.3→3.0.0 jsonify 0.2.1→1.0.0 sccr 1.0→2.0 intccr 1.1.4→2.0.0 TestDesign 0.2.5→1.0.0 rlfsm 0.3.1→1.0.0 survival 2.44-1.1→3.1-6 Eagle 1.5.2→2.0.0 ss3sim 0.9.5→1.0.3 LatticeKrig 7.0→8.4 glmnet 2.0-18→3.0 netCoin 0.3.2→1.1.23 CorrMixed 0.1-13→1.0 EffectTreat 0.4→1.0 WRSS 2.3→3.0 fields 9.9→10.0

First-time CRAN authors

Mehran Aflakparast Laura Saba ×2 Harry Smith Pierre-Yves Berrard Jian Cao Yanru Cui ×3 Dillon Duncan Marc Genton Jiaxin Hu ×3 David Keyes Chanwoo Lee Mark V. Murphy Wolfgang Raffelsberger ×4 Shaun Zheng Sun George Turkiyyah Miaoyan Wang ×3 Chenwu Xu ×3 Yang Xu ×3 Guangning Yu ×2 Chen Zhang ×2